RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 SLC2A4P14672 509 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ALAS2P22557 587 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 EEF1DP29692 281 aaKnown RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 HOXA9P31269 272 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SOAT1P35610 550 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 CCR10P46092 362 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 RPIAP49247 311 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 MEF2AQ02078 507 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 FOXM1Q08050 763 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 TMEM115Q12893 351 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SRSF5Q13243 272 aaKnown RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SMAD4Q13485 552 aaKnown RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 LRRC32Q14392 662 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 E2F5Q15329 346 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 CLEC6AQ6EIG7 209 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 FAM45BPQ6NSW5 357 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 IL27RAQ6UWB1 636 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SPATA21Q7Z572 469 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 FAM20CQ8IXL6 584 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 KIF2BQ8N4N8 673 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 GPR26Q8NDV2 337 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 STAG3L4Q8TBR4 150 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 FAM45AQ8TCE6 357 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 EEF1AKMT1Q8WVE0 214 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SLC44A1Q8WWI5 657 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 NCLNQ969V3 563 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 KLHL29Q96CT2 875 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 KLHDC7BQ96G42 594 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SGSM3Q96HU1 749 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 APOPT1Q96IL0 206 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 LMLNQ96KR4 655 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 CATSPER2Q96P56 530 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 PRSS16Q9NQE7 514 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 TBC1D30Q9Y2I9 924 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 KLHL20Q9Y2M5 609 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 STARD13Q9Y3M8 1113 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 UNC80Q8N2C7 3258 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 H0Y3Z8 333 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ZMPSTE24O75844 475 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 CRABP2P29373 138 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 GGT5P36269 586 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 GRIA4P48058 902 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 LRRC74AQ0VAA2 488 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 BST1Q10588 318 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 CUL3Q13618 768 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 XKR6Q5GH73 641 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 AGBL2Q5U5Z8 902 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 IQCKQ8N0W5 287 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ZBTB2Q8N680 514 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ZNF614Q8N883 585 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 OR4E2Q8NGC2 313 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ARRDC2Q8TBH0 407 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SELENOMQ8WWX9 145 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 LCN9Q8WX39 176 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ATOH1Q92858 354 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 MTBPQ96DY7 904 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 LRRC37BQ96QE4 947 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SLC17A9Q9BYT1 436 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 MRPL46Q9H2W6 279 aaKnown RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 C8orf33Q9H7E9 229 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 VIPAS39Q9H9C1 493 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SH3BP4Q9P0V3 963 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 TEX264Q9Y6I9 313 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SVILO95425 2214 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 MICAL3Q7RTP6 2002 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SYCE1LA8MT33 242 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 CACNG3O60359 315 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 LILRB3O75022 631 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ZWINTO95229 277 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 MLNP12872 115 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 DRD1P21728 446 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 KELP23276 732 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 IVDP26440 423 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 EPHA3P29320 983 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 GRK3P35626 688 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 NSG1P42857 185 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 GSCP56915 257 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 NFE2L1Q14494 772 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 DBN1Q16643 649 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 VWA5B1Q5TIE3 1220 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 BEND5Q7L4P6 421 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SNX20Q7Z614 316 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 TRABD2AQ86V40 505 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 GATAD2AQ86YP4 633 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 NRSN1Q8IZ57 195 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 CPXM2Q8N436 756 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 FSTL5Q8N475 847 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 TMEM145Q8NBT3 493 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 OR2T3Q8NH03 318 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ZCCHC10Q8TBK6 192 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SP7Q8TDD2 431 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ARRDC3Q96B67 414 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ZBTB18Q99592 522 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SLC38A3Q99624 504 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 RBBP8Q99708 897 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SMOC1Q9H4F8 434 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 WDR55Q9H6Y2 383 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 COPS7BQ9H9Q2 264 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 IL26Q9NPH9 171 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SLC12A4Q9UP95 1085 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms