RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 ANAPC5Q9UJX4 755 aa12.81□□□□□ -0.36
NEDD8-208ENST00000560427 PADI4Q9UM07 663 aa12.81□□□□□ -0.36
NEDD8-208ENST00000560427 UTP11Q9Y3A2 253 aaKnown RBP12.81□□□□□ -0.36
NEDD8-208ENST00000560427 ST14Q9Y5Y6 855 aa12.81□□□□□ -0.36
NEDD8-208ENST00000560427 ARID1BQ8NFD5 2236 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-208ENST00000560427 C17orf113A0A1B0GUU1 675 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 A6NCN8 305 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 PFDN6O15212 129 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 ZW10O43264 779 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 RAD51CO43502 376 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 TTC4O95801 387 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 ATP1B2P14415 290 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-208ENST00000560427 GLB1P16278 677 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 PGAM1P18669 254 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 NMBRP28336 390 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 ITGA8P53708 1063 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 ARL4CP56559 192 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 B4GALNT1Q00973 533 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 CBLBQ13191 982 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 KCTD19Q17RG1 926 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-208ENST00000560427 FNBP1LQ5T0N5 605 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 RNF187Q5TA31 235 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-208ENST00000560427 N4BP2L1Q5TBK1 243 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-208ENST00000560427 AGAP9Q5VTM2 703 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 MRNIPQ6NTE8 343 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 C8orf74Q6P047 294 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 TMEM220Q6QAJ8 160 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 WASH2PQ6VEQ5 465 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 AMZ2Q86W34 360 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 LMNTD2Q8IXW0 634 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 PIANPQ8IYJ0 282 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 GABPB2Q8TAK5 448 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-208ENST00000560427 IFI44Q8TCB0 444 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 MFSD3Q96ES6 412 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 SIGLEC10Q96LC7 697 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 FAM96AQ9H5X1 160 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 STN1Q9H668 368 aaKnown RBP12.8□□□□□ -0.36
NEDD8-208ENST00000560427 WASH6PQ9NQA3 447 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 KLC4Q9NSK0 619 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 SIRPGQ9P1W8 387 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 GULP1Q9UBP9 304 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 KCNK6Q9Y257 313 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 PRKAB1Q9Y478 270 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 PCNX2A6NKB5 2137 aa12.8□□□□□ -0.36
NEDD8-208ENST00000560427 MGAT4DA6NG13 374 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 OR2AG2A6NM03 316 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 POP7O75817 140 aaKnown RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 VAPBO95292 243 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 POLBP06746 335 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 F3P13726 295 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 IDSP22304 550 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 PMLP29590 882 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 RPL21P46778 160 aaKnown RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 FASLGP48023 281 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 ARCN1P48444 511 aaKnown RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 CDKN1CP49918 316 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 CAV1Q03135 178 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 NR1D2Q14995 579 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 SMAD1Q15797 465 aaKnown RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 HIF1AQ16665 826 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 PLA2G4EQ3MJ16 856 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 DUPD1Q68J44 220 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 GUSBP11Q6P575 273 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 ABRAXAS1Q6UWZ7 409 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 EFL1Q7Z2Z2 1120 aaKnown RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 ZNF438Q7Z4V0 828 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 RAB44Q7Z6P3 723 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 SLCO6A1Q86UG4 719 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 NAGSQ8N159 534 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 CACTIN-AS1Q8N1I8 211 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 GALNT15Q8N3T1 639 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 SFRP1Q8N474 314 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 BEND7Q8N7W2 519 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 CEP112Q8N8E3 955 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 GPR150Q8NGU9 434 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 OR2L2Q8NH16 312 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 HM13Q8TCT9 377 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 MAPK15Q8TD08 544 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 ZNF669Q96BR6 464 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 SGF29Q96ES7 293 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 STAMBPL1Q96FJ0 436 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 TCF12Q99081 682 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 EBNA1BP2Q99848 306 aaKnown RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 TRIM31Q9BZY9 425 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 OSGEPL1Q9H4B0 414 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 TBC1D29Q9UFV1 150 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 SLC23A2Q9UGH3 650 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 VPS9D1Q9Y2B5 631 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 PLEKHM1Q9Y4G2 1056 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 MAD1L1Q9Y6D9 718 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 RPS6KL1Q9Y6S9 549 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 PLXNB3Q9ULL4 1909 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 DCHS1Q96JQ0 3298 aa12.79□□□□□ -0.36
NEDD8-208ENST00000560427 TDRD6O60522 2096 aaKnown RBP12.79□□□□□ -0.36
NEDD8-208ENST00000560427 ZCWPW2A0A1B0GU75 182 aa12.78□□□□□ -0.36
NEDD8-208ENST00000560427 CPED1A4D0V7 1026 aa12.78□□□□□ -0.36
NEDD8-208ENST00000560427 CTAGE15A4D2H0 777 aa12.78□□□□□ -0.36
NEDD8-208ENST00000560427 OR51F1A6NGY5 319 aa12.78□□□□□ -0.36
NEDD8-208ENST00000560427 CD3EAPO15446 510 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms