RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 KRT37O76014 449 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 TRIM16O95361 564 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 EML2O95834 649 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 ZNF7P17097 686 aaPredicted RBP16.57■□□□□ 0.24
RPL28-209ENST00000560055 RPL21P46778 160 aaKnown RBP16.57■□□□□ 0.24
RPL28-209ENST00000560055 ARCN1P48444 511 aaKnown RBP16.57■□□□□ 0.24
RPL28-209ENST00000560055 DMPKQ09013 629 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 FOXC1Q12948 553 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 TUBB2AQ13885 445 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 ITIH4Q14624 930 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 C14orf28Q4W4Y0 310 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 FNBP1LQ5T0N5 605 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 KIAA0930Q6ICG6 404 aaPredicted RBP16.57■□□□□ 0.24
RPL28-209ENST00000560055 CES3Q6UWW8 571 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 PACS1Q6VY07 963 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 TAS2R42Q7RTR8 314 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 RAB44Q7Z6P3 723 aaPredicted RBP16.57■□□□□ 0.24
RPL28-209ENST00000560055 TMEM135Q86UB9 458 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 OR6P1Q8NGX9 317 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 KIF18AQ8NI77 898 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 NAT6Q93015 286 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 LINC00615Q96LM1 132 aaPredicted RBP16.57■□□□□ 0.24
RPL28-209ENST00000560055 TRIM56Q9BRZ2 755 aaKnown RBP16.57■□□□□ 0.24
RPL28-209ENST00000560055 ERP44Q9BS26 406 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 TUBB2BQ9BVA1 445 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 KLC4Q9NSK0 619 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 TBC1D29Q9UFV1 150 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 PADI4Q9UM07 663 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 RP1P56715 2156 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 FREM2Q5SZK8 3169 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 KNTC1P50748 2209 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 CFAP99D6REC4 459 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 KCNJ13O60928 360 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 POP7O75817 140 aaKnown RBP16.56■□□□□ 0.24
RPL28-209ENST00000560055 RALBP11234 206 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 CDK4P11802 303 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 ATP1B2P14415 290 aaPredicted RBP16.56■□□□□ 0.24
RPL28-209ENST00000560055 PRLHRP49683 370 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 ITGA8P53708 1063 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 SHC2P98077 582 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 SEMA3AQ14563 771 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 INSCQ1MX18 579 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 PLA2G4EQ3MJ16 856 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 MSS51Q4VC12 460 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 DUPD1Q68J44 220 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 CASC4Q6P4E1 433 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 XKR5Q6UX68 686 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 CERS6Q6ZMG9 384 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 DET1Q7L5Y6 550 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 EFL1Q7Z2Z2 1120 aaKnown RBP16.56■□□□□ 0.24
RPL28-209ENST00000560055 AMZ2Q86W34 360 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 BEND7Q8N7W2 519 aaPredicted RBP16.56■□□□□ 0.24
RPL28-209ENST00000560055 IFI44Q8TCB0 444 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 NAT14Q8WUY8 206 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 PATE1Q8WXA2 126 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 DCUN1D1Q96GG9 259 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 FCRL3Q96P31 734 aaPredicted RBP16.56■□□□□ 0.24
RPL28-209ENST00000560055 TRIM31Q9BZY9 425 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 MARCH4Q9P2E8 410 aaPredicted RBP16.56■□□□□ 0.24
RPL28-209ENST00000560055 SNX24Q9Y343 169 aa16.56■□□□□ 0.24
RPL28-209ENST00000560055 ZCWPW2A0A1B0GU75 182 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 NUDT21O43809 227 aaKnown RBP16.55■□□□□ 0.24
RPL28-209ENST00000560055 GLB1P16278 677 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 NSG1P42857 185 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 MAZP56270 477 aaKnown RBP16.55■□□□□ 0.24
RPL28-209ENST00000560055 DHX9Q08211 1270 aaKnown RBP16.55■□□□□ 0.24
RPL28-209ENST00000560055 ANKRD20A4Q4UJ75 823 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 ZNF658BQ4V348 819 aaPredicted RBP16.55■□□□□ 0.24
RPL28-209ENST00000560055 FASTKD1Q53R41 847 aaKnown RBP16.55■□□□□ 0.24
RPL28-209ENST00000560055 PERM1Q5SV97 790 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 LYPLAL1Q5VWZ2 237 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 DHRS13Q6UX07 377 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 SFRP1Q8N474 314 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 ARL14Q8N4G2 192 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 OR6C4Q8NGE1 309 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.55■□□□□ 0.24
RPL28-209ENST00000560055 CATSPERZQ9NTU4 200 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 SAMD15Q9P1V8 674 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 WHRNQ9P202 907 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 RABGEF1Q9UJ41 708 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 IGF2RP11717 2491 aa16.55■□□□□ 0.24
RPL28-209ENST00000560055 CPED1A4D0V7 1026 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 KLHL33A6NCF5 533 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 MGAT4DA6NG13 374 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 CD3EAPO15446 510 aaKnown RBP16.54■□□□□ 0.24
RPL28-209ENST00000560055 USP1O94782 785 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 AP2A2O94973 939 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 VAPBO95292 243 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 F3P13726 295 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 PNLIPP16233 465 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 FASLGP48023 281 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 E2F1Q01094 437 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 CBLBQ13191 982 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 NR1D2Q14995 579 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 SMAD1Q15797 465 aaKnown RBP16.54■□□□□ 0.24
RPL28-209ENST00000560055 ST3GAL2Q16842 350 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 CCDC157Q569K6 752 aa16.54■□□□□ 0.24
RPL28-209ENST00000560055 DNAJC21Q5F1R6 531 aaKnown RBP16.54■□□□□ 0.24
RPL28-209ENST00000560055 AARS2Q5JTZ9 985 aaKnown RBP16.54■□□□□ 0.24
RPL28-209ENST00000560055 AGAP9Q5VTM2 703 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms