RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 WISP3O95389 354 aaPredicted RBP16.36■□□□□ 0.21
TPM1-219ENST00000559397 PRAMEF1O95521 474 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 PCCBP05166 539 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 CD27P26842 260 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 IGFALSP35858 605 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 PTGER3P43115 390 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 IRF9Q00978 393 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 CCDC153Q494R4 210 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 FASTKD1Q53R41 847 aaKnown RBP16.36■□□□□ 0.21
TPM1-219ENST00000559397 TAF1BQ53T94 588 aaPredicted RBP16.36■□□□□ 0.21
TPM1-219ENST00000559397 PNCKQ6P2M8 343 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 TRIM42Q8IWZ5 723 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 GPATCH11Q8N954 259 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 TMEM145Q8NBT3 493 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 RAB3IL1Q8TBN0 382 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 GRAMD1AQ96CP6 724 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 ZSCAN5AQ9BUG6 496 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 SPATA16Q9BXB7 569 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 PITPNM3Q9BZ71 974 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 SLCO1B3Q9NPD5 702 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 ZNF358Q9NW07 568 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 SLCO1B1Q9Y6L6 691 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 PLXNB3Q9ULL4 1909 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 PRAMEF26H0Y7S4 382 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 PRSS56P0CW18 603 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 TEAD1P28347 426 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 AKT2P31751 481 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 ATP13A5Q4VNC0 1218 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 HECTD2Q5U5R9 776 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 RAET1GQ6H3X3 334 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 CGB2Q6NT52 195 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 ZNF549Q6P9A3 640 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 RAPH1Q70E73 1250 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 SNX20Q7Z614 316 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 CENPLQ8N0S6 344 aaPredicted RBP16.35■□□□□ 0.21
TPM1-219ENST00000559397 PRSS33Q8NF86 280 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 C1orf216Q8TAB5 229 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 ZNF398Q8TD17 642 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 SNX19Q92543 992 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 TSPAN17Q96FV3 270 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 BMFQ96LC9 184 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 OLFM1Q99784 485 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 MYOCQ99972 504 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 ELAC2Q9BQ52 826 aaKnown RBP16.35■□□□□ 0.21
TPM1-219ENST00000559397 EIF2B4Q9UI10 523 aaKnown RBP16.35■□□□□ 0.21
TPM1-219ENST00000559397 TMPRSS11EQ9UL52 423 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 CNOT6Q9ULM6 557 aaKnown RBP16.35■□□□□ 0.21
TPM1-219ENST00000559397 CA5BQ9Y2D0 317 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 ACOT9Q9Y305 439 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 VWA7Q9Y334 891 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 HS3ST3A1Q9Y663 406 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 SPAG17Q6Q759 2223 aa16.35■□□□□ 0.21
TPM1-219ENST00000559397 A0A087X1B8 175 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 MEI4A8MW99 385 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 UGT1A6P19224 532 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 SAT1P21673 171 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 BGNP21810 368 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 UGT1A1P22309 533 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 UGT1A4P22310 534 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 MAOBP27338 520 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 UGT1A3P35503 534 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 UGT1A5P35504 534 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 TRIM23P36406 574 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 GPR1P46091 355 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 CDKN1CP49918 316 aaPredicted RBP16.34■□□□□ 0.21
TPM1-219ENST00000559397 CLDN2P57739 230 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 TCF15Q12870 199 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 NFATC2Q13469 925 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 INPP5AQ14642 412 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 FAM45BPQ6NSW5 357 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 ADAMTSL4Q6UY14 1074 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 GCNT7Q6ZNI0 430 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 FAM47EQ6ZV65 393 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 CEP68Q76N32 757 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 ARMCX6Q7L4S7 300 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 CCDC91Q7Z6B0 441 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 NUDCD3Q8IVD9 361 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 CACNA2D3Q8IZS8 1091 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 FAM45AQ8TCE6 357 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 LPGAT1Q92604 370 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 GPR78Q96P69 363 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 NDNQ99608 321 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 PRRX2Q99811 253 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 MECRQ9BV79 373 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 FAM96AQ9H5X1 160 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 ASB8Q9H765 288 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 SLC30A1Q9Y6M5 507 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 TRBV5-4A0A0C4DH59 114 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 POM121BA6NF01 834 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 EBAG9O00559 213 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 FPGTO14772 594 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 PYGLP06737 847 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 PMLP29590 882 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 PGGT1BP53609 377 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 SLC12A2P55011 1212 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 CACNG1Q06432 222 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 ITGA9Q13797 1035 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 SIM2Q14190 667 aaPredicted RBP16.34■□□□□ 0.21
TPM1-219ENST00000559397 PCLAFQ15004 111 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 PSAPL1Q6NUJ1 521 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms