RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 FAM8A1Q9UBU6 413 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 TCAF1Q9Y4C2 921 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 UNC13CQ8NB66 2214 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 GOLGA6L10A0A0M3HER8 536 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 HEATR9A2RTY3 570 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 A6NCN8 305 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 RHPN2P1A8MT19 583 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 H7C0S8 307 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 CSO75390 466 aaKnown RBP13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 GAS8O95995 478 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 GOT2P00505 430 aaKnown RBP13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 CDK4P11802 303 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 PSMA3P25788 255 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 NMBRP28336 390 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 CASQ1P31415 396 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 FNTAP49354 379 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 NFE2L1Q14494 772 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 SEMA3AQ14563 771 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 DBN1Q16643 649 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 AMZ1Q400G9 498 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 PCID2Q5JVF3 399 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 USP53Q70EK8 1073 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 TMPRSS9Q7Z410 1059 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 LDB1Q86U70 411 aaPredicted RBP13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 CAND1Q86VP6 1230 aaKnown RBP13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 SFRP1Q8N474 314 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 DCBLD1Q8N8Z6 715 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 RANBP9Q96S59 729 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 LRRN3Q9H3W5 708 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 PSMD13Q9UNM6 376 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 WDR37Q9Y2I8 494 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 PRSS21Q9Y6M0 314 aa13.61□□□□□ -0.23
TSPAN3-205ENST00000558745 ZNF106Q9H2Y7 1883 aaKnown RBP13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 TRBV5-4A0A0C4DH59 114 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 PMS2P1A4D2B8 440 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 PRR19A6NJB7 356 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 PDZK1P1A8MUH7 402 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 GPR89AB7ZAQ6 455 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 NTN3O00634 580 aaPredicted RBP13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 NUDT21O43809 227 aaKnown RBP13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 GPR89BP0CG08 455 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 BRAFP15056 766 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 ACRV1P26436 265 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 FOXN2P32314 431 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 NPY2RP49146 381 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 PDX1P52945 283 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 CACNG1Q06432 222 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 BIRC2Q13490 618 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 CLCA4Q14CN2 919 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 PPP1R7Q15435 360 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 XKR5Q6UX68 686 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 SPRED1Q7Z699 444 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 B3GNT8Q7Z7M8 397 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 AMZ2Q86W34 360 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 CCNJLQ8IV13 435 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 LILRA3Q8N6C8 439 aaPredicted RBP13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 CLDN19Q8N6F1 224 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 PPHLN1Q8NEY8 458 aaKnown RBP13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 OR6P1Q8NGX9 317 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 MDM1Q8TC05 714 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 ULK4Q96C45 1275 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 DCUN1D1Q96GG9 259 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 COPS8Q99627 209 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 TIMM29Q9BSF4 260 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 FOXP3Q9BZS1 431 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 RDH14Q9HBH5 336 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 ZDHHC3Q9NYG2 299 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 BFARQ9NZS9 450 aa13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 ZNF624Q9P2J8 865 aaPredicted RBP13.6□□□□□ -0.23
TSPAN3-205ENST00000558745 A0A1W2PNU3 283 aaPredicted RBP13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 OR52A4PA6NMU1 304 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 GOLGA8KD6RF30 607 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 GOLGA8TH3BQL2 631 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 OR1I1O60431 355 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 POLBP06746 335 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 F3P13726 295 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 ATP1B2P14415 290 aaPredicted RBP13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 IDSP22304 550 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 MPSTP25325 297 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 SLC19A1P41440 591 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 MAGEA6P43360 314 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 CLCNKAP51800 687 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 ETF1P62495 437 aaKnown RBP13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 CYP4F3Q08477 520 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 SPIDRQ14159 915 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 ISXQ2M1V0 245 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 GPR33Q49SQ1 333 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 NAPRTQ6XQN6 538 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 AGGF1Q8N302 714 aaeCLIP13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 NAT8LQ8N9F0 302 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 OR6C4Q8NGE1 309 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 GRK7Q8WTQ7 553 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 MFSD3Q96ES6 412 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 ATXN7L3BQ96GX2 97 aa13.59□□□□□ -0.23
TSPAN3-205ENST00000558745 GFM1Q96RP9 751 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms