RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 DFFAO00273 331 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 PCDH17O14917 1159 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 GRID2O43424 1007 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 NUAK1O60285 661 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 SOCS5O75159 536 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 PGLSO95336 258 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 JCHAINP01591 159 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 KLK3P07288 261 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-206ENST00000558739 CYP11B1P15538 503 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 PTPN9P43378 593 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 ARCN1P48444 511 aaKnown RBP11.6□□□□□ -0.55
SMAD3-206ENST00000558739 GSDMDP57764 484 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 NOMO3P69849 1222 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 NSUN2Q08J23 767 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMAD3-206ENST00000558739 ZNF324BQ6AW86 544 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-206ENST00000558739 CYB5D1Q6P9G0 228 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 FAM180AQ6UWF9 173 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 STRADAQ7RTN6 431 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 FAM71AQ8IYT1 594 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 D2HGDHQ8N465 521 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 AOPEPQ8N6M6 819 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 AVL9Q8NBF6 648 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 DNAJB14Q8TBM8 379 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 PIH1D2Q8WWB5 315 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 TM9SF4Q92544 642 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 CLIP3Q96DZ5 547 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-206ENST00000558739 LRFN5Q96NI6 719 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 GBP5Q96PP8 586 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 TAAR6Q96RI8 345 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 TMEM121Q9BTD3 319 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 CATSPERBQ9H7T0 1116 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 KCND1Q9NSA2 647 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 P4HTMQ9NXG6 502 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 SUCOQ9UBS9 1254 aaKnown RBP11.6□□□□□ -0.55
SMAD3-206ENST00000558739 CFAP45Q9UL16 551 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 CTNND2Q9UQB3 1225 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 WDR37Q9Y2I8 494 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 PSMA7O14818 248 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 CNOT3O75175 753 aaKnown RBP11.59□□□□□ -0.55
SMAD3-206ENST00000558739 WISP2O76076 250 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 MMEP08473 750 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 KLK2P20151 261 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 IL4RP24394 825 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 PON1P27169 355 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 ARL4DP49703 201 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 STC1P52823 247 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 HSD11B2P80365 405 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 IHHQ14623 411 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 TDRD12Q587J7 1177 aaKnown RBP11.59□□□□□ -0.55
SMAD3-206ENST00000558739 DNTTIP2Q5QJE6 756 aaKnown RBP11.59□□□□□ -0.55
SMAD3-206ENST00000558739 SCYL2Q6P3W7 929 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 NCCRP1Q6ZVX7 275 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-206ENST00000558739 USP45Q70EL2 814 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 PPP1R32Q7Z5V6 425 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 NOP9Q86U38 636 aaKnown RBP11.59□□□□□ -0.55
SMAD3-206ENST00000558739 TGIF2LYQ8IUE0 185 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 CATSPER1Q8NEC5 780 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 OR1L3Q8NH93 324 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 CHTF18Q8WVB6 975 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 C11orf70Q9BRQ4 267 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 RAB33BQ9H082 229 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 FAM207AQ9NSI2 230 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-206ENST00000558739 POT1Q9NUX5 634 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 RMND1Q9NWS8 449 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 DNAJC12Q9UKB3 198 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 FZD10Q9ULW2 581 aa11.59□□□□□ -0.55
SMAD3-206ENST00000558739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 TLCD2A6NGC4 264 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 ARHGAP42A6NI28 874 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 FGF10O15520 208 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 CCP110O43303 1012 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 IPO13O94829 963 aaKnown RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 PEX11BO96011 259 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 RFC1P35251 1148 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 PBX1P40424 430 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 CA7P43166 264 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 TPI1P60174 286 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 FOXD4Q12950 439 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 LBRQ14739 615 aaKnown RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 CA9Q16790 459 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 INSCQ1MX18 579 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 GFRALQ6UXV0 394 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 RPTNQ6XPR3 784 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 BPHLQ86WA6 291 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 HSCBQ8IWL3 235 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 BCORP1Q8N888 145 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 NELFBQ8WX92 580 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 CPT1BQ92523 772 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 HDAC11Q96DB2 347 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 MAGEB10Q96LZ2 347 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 FER1L6-AS2Q96M78 137 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 SMR3AQ99954 134 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 ACTR5Q9H9F9 607 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-206ENST00000558739 DLL4Q9NR61 685 aa11.58□□□□□ -0.56
SMAD3-206ENST00000558739 UBA6A0AVT1 1052 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms