RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ATP1B2P14415 290 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 SLC2A4P14672 509 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 GLB1P16278 677 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 NMBRP28336 390 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 PBLDP30039 288 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 SHC2P98077 582 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 INSM1Q01101 510 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 SMAD1Q15797 465 aaKnown RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 SEPT7Q16181 437 aaKnown RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 DBN1Q16643 649 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 BCL7AQ4VC05 210 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 FASTKD1Q53R41 847 aaKnown RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 HES3Q5TGS1 186 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 CES3Q6UWW8 571 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 TMPRSS7Q7RTY8 843 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 AMZ2Q86W34 360 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 TMPRSS12Q86WS5 348 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 C17orf82Q86X59 251 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 MPP5Q8N3R9 675 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 BEND7Q8N7W2 519 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 OR4L1Q8NH43 312 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 SLC37A2Q8TED4 501 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 MFSD3Q96ES6 412 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 CCDC3Q9BQI4 270 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 SYNDIG1Q9H7V2 258 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 PRDM8Q9NQV8 689 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 TREX1Q9NSU2 369 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 LRIT1Q9P2V4 623 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 RABGEF1Q9UJ41 708 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 CDC23Q9UJX2 597 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 ANAPC5Q9UJX4 755 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 KLK13Q9UKR3 277 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 DNMT3AQ9Y6K1 912 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 RNF215Q9Y6U7 377 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 IGLV3-16A0A075B6K0 115 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 A6NCN8 305 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 SDR42E2A6NKP2 422 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 RHPN2P1A8MT19 583 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 PDZK1P1A8MUH7 402 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 EFCAB8A8MWE9 144 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 KIF2AO00139 706 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-205ENST00000558428 KCNJ13O60928 360 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 TUBB4AP04350 444 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 F3P13726 295 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 JUPP14923 745 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 IDSP22304 550 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 IVDP26440 423 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 MAGEA3P43357 314 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 PRLHRP49683 370 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 MRPS25P82663 173 aaKnown RBP12.15□□□□□ -0.46
SMAD3-205ENST00000558428 CKAP4Q07065 602 aaKnown RBP12.15□□□□□ -0.46
SMAD3-205ENST00000558428 ITIH4Q14624 930 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 LYPLAL1Q5VWZ2 237 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 ARMC3Q5W041 872 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 IYDQ6PHW0 289 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 HOOK3Q86VS8 718 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 SFRP1Q8N474 314 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 Q8N9G6 341 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-205ENST00000558428 SGSM3Q96HU1 749 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 TTC1Q99614 292 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 TRIM31Q9BZY9 425 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 CATSPERZQ9NTU4 200 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 MAD1L1Q9Y6D9 718 aa12.15□□□□□ -0.46
SMAD3-205ENST00000558428 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
SMAD3-205ENST00000558428 KIR2DS5A0A0G2JLQ3 304 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 A0A0G2JNG1 304 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 MAGEB16A2A368 324 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 FAM149AA5PLN7 773 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 FAM187AA6NFU0 413 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 MGAT4DA6NG13 374 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 PRR19A6NJB7 356 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 OR5K4A6NMS3 321 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 KIR2DS3K7RE56 304 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 RAD51CO43502 376 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 SGTAO43765 313 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 VAPBO95292 243 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 MT-CO3P00414 261 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 PNLIPP16233 465 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 RPL10P27635 214 aaKnown RBP12.14□□□□□ -0.47
SMAD3-205ENST00000558428 PPARGP37231 505 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-205ENST00000558428 NSG1P42857 185 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 DRG2P55039 364 aaKnown RBP12.14□□□□□ -0.47
SMAD3-205ENST00000558428 HHEXQ03014 270 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 DMPKQ09013 629 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 NFE2L1Q14494 772 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 KIR2DS5Q14953 304 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 MORF4L2Q15014 288 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 AARS2Q5JTZ9 985 aaKnown RBP12.14□□□□□ -0.47
SMAD3-205ENST00000558428 CERS6Q6ZMG9 384 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 MAATS1Q7Z4T9 603 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 SLC9B2Q86UD5 537 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 MARCH9Q86YJ5 346 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 CLDN19Q8N6F1 224 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 OTUD6BQ8N6M0 293 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 OR2L2Q8NH16 312 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 WDR48Q8TAF3 677 aa12.14□□□□□ -0.47
SMAD3-205ENST00000558428 ZNF669Q96BR6 464 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-205ENST00000558428 SNF8Q96H20 258 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms