RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ZSCAN5AQ9BUG6 496 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 LGR4Q9BXB1 951 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 CDH19Q9H159 772 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 WDR26Q9H7D7 661 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 GDF3Q9NR23 364 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 PHPT1Q9NRX4 125 aaPredicted RBP11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 IL1RAPL1Q9NZN1 696 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 MTRF1LQ9UGC7 380 aaKnown RBP11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 APPL1Q9UKG1 709 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 PCDHGA5Q9Y5G8 931 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 RPS6KL1Q9Y6S9 549 aa11.91□□□□□ -0.5
HMGB1P8-201ENST00000558211 FAM237BA0A1B0GVD1 139 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 GOLGA8KD6RF30 607 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 GOLGA8TH3BQL2 631 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 GAPDHSO14556 408 aaPredicted RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 SCAMP1O15126 338 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 VILLO15195 856 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 MTX2O75431 263 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 SLC25A14O95258 325 aaPredicted RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 VAPBO95292 243 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 GOT2P00505 430 aaKnown RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 PYGLP06737 847 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 ITGALP20701 1170 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 CA5AP35218 305 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 TRIM23P36406 574 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 CDKN1CP49918 316 aaPredicted RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 IRX4P78413 519 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 DAB2P98082 770 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 CDK3Q00526 305 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 ITGA9Q13797 1035 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 FASTKD3Q14CZ7 662 aaKnown RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 KIF19Q2TAC6 998 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 ANKRD20A4Q4UJ75 823 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 ZNF542PQ5EBM4 170 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 TPRG1LQ5T0D9 272 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 TCEAL6Q6IPX3 200 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 RD3Q7Z3Z2 195 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 RABEPKQ7Z6M1 372 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 CACTIN-AS1Q8N1I8 211 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 DCLK2Q8N568 766 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 OTUD6BQ8N6M0 293 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 PNPLA1Q8N8W4 532 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 TMEM102Q8N9M5 508 aaPredicted RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 FBXO36Q8NEA4 188 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 CEP76Q8TAP6 659 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 PYROXD1Q8WU10 500 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 TMEM131Q92545 1883 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 UBXN4Q92575 508 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 TCEAL3Q969E4 200 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 HIC2Q96JB3 615 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 NUSAP1Q9BXS6 441 aaKnown RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 MRM3Q9HC36 420 aaKnown RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 TREX1Q9NSU2 369 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 ZDHHC18Q9NUE0 388 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 NFKBIL1Q9UBC1 381 aaPredicted RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 ZC3H7BQ9UGR2 993 aaKnown RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 CRLS1Q9UJA2 301 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 CNOT6Q9ULM6 557 aaKnown RBP11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 NFU1Q9UMS0 254 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 ANKRD6Q9Y2G4 727 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 TMEM98Q9Y2Y6 226 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 SNX11Q9Y5W9 270 aa11.9□□□□□ -0.5
HMGB1P8-201ENST00000558211 PLXNB3Q9ULL4 1909 aa11.9□□□□□ -0.51
HMGB1P8-201ENST00000558211 ZNF106Q9H2Y7 1883 aaKnown RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 TMEM202A6NGA9 273 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 MAGEC1O60732 1142 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 POLBP06746 335 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 PGAM1P18669 254 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 PAMP19021 973 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 HTR1BP28222 390 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 HOXD12P35452 270 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 POLD2P49005 469 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 YPEL5P62699 121 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 NFATC2Q13469 925 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 CUL1Q13616 776 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 PTK2BQ14289 1009 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 NFATC4Q14934 902 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 SF3A2Q15428 464 aaKnown RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 TCEA2Q15560 299 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 ERCC6LQ2NKX8 1250 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 TSNAXIP1Q2TAA8 658 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 FASTKD1Q53R41 847 aaKnown RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 AFTPHQ6ULP2 937 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 MARK2Q7KZI7 788 aaKnown RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 SNX20Q7Z614 316 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 IQCHQ86VS3 1027 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 SPATS2Q86XZ4 545 aaKnown RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 WFDC8Q8IUA0 241 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 PALM2Q8IXS6 379 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 DMRTC2Q8IXT2 367 aaPredicted RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 GSPT2Q8IYD1 628 aaKnown RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 OR4L1Q8NH43 312 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 BTN2A2Q8WVV5 523 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 GLYATL1Q969I3 302 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 TSACCQ96A04 125 aaPredicted RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 C9orf72Q96LT7 481 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 FMO2Q99518 471 aa11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 WDR83Q9BRX9 315 aaKnown RBP11.89□□□□□ -0.51
HMGB1P8-201ENST00000558211 GTPBP2Q9BX10 602 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms