RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RAB40ALP0C0E4 278 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 EGR2P11161 476 aaPredicted RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 UNGP13051 313 aaPredicted RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 ITGB7P26010 798 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 CCND3P30281 292 aaPredicted RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 TIA1P31483 386 aaKnown RBP eCLIP3.75□□□□□ -1.81
TDP1-217ENST00000557782 CNR2P34972 360 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 GRIA3P42263 894 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 IFNAR2P48551 515 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 CXCR3P49682 368 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 ASCL1P50553 236 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 PTENP60484 403 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 SNRPEP62304 92 aaKnown RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 BLOC1S1P78537 153 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 PRKCEQ02156 737 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 GRIK2Q13002 908 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 NR1D2Q14995 579 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 OASLQ15646 514 aaKnown RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 MAPK11Q15759 364 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 UGP2Q16851 508 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 C2orf68Q2NKX9 166 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 GGNBP1Q5YKI7 109 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 TXNRD3NBQ6F5E7 133 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 NHLRC1Q6VVB1 395 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 MEX3BQ6ZN04 569 aaKnown RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 RGS9BPQ6ZS82 235 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 TPRG1Q6ZUI0 275 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 ARMC9Q7Z3E5 817 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 PEG10Q86TG7 708 aaKnown RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 ZNF410Q86VK4 478 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 FOXP4Q8IVH2 680 aaPredicted RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 BATF2Q8N1L9 274 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 CMASQ8NFW8 434 aaPredicted RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 OR1J2Q8NGS2 313 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 WDR20Q8TBZ3 569 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 FAM216AQ8WUB2 273 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 SHC3Q92529 594 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 RAD54LQ92698 747 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 KAT2AQ92830 837 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 EDAQ92838 391 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 SNRNP40Q96DI7 357 aaKnown RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 SPDL1Q96EA4 605 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 TEPSINQ96N21 525 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 MUS81Q96NY9 551 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 WNT5BQ9H1J7 359 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 RAD21L1Q9H4I0 556 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 MVB12BQ9H7P6 319 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 MMRN2Q9H8L6 949 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 SRD5A3Q9H8P0 318 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 LMAN1LQ9HAT1 526 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 CD320Q9NPF0 282 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 FAM118AQ9NWS6 357 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 CISD1Q9NZ45 108 aaKnown RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 TBC1D7Q9P0N9 293 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 STK39Q9UEW8 545 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 CTNNA3Q9UI47 895 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 HPCAL4Q9UM19 191 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 RAP2CQ9Y3L5 183 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 TEX264Q9Y6I9 313 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 TRBV5-7A0A0A0MS05 114 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 ARHGAP42A6NI28 874 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 EIF4E1BA6NMX2 242 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 LINC00473A8K010 186 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 M0QZ24 198 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 PPP6CO00743 305 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 PTGESO14684 152 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 INPPL1O15357 1258 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SSX5O60225 188 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 HSF2BPO75031 334 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 TOMM70O94826 608 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 GLCEO94923 617 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 NDUFB4O95168 129 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SNX4O95219 450 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 LUC7L3O95232 432 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 KCNK5O95279 499 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 MT-ATP6P00846 226 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 FGBP02675 491 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 OPN1MWP04001 364 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SERPING1P05155 500 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SBK2P0C263 348 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 DANCRP0C864 163 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 PLA2G4BP0C869 781 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 OPN1MW2P0DN77 364 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 OPN1MW3P0DN78 364 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 KRT5P13647 590 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 AREGP15514 252 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 DDX5P17844 614 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 AZGP1P25311 298 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 ACRV1P26436 265 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 NMBRP28336 390 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SFNP31947 248 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 HNMTP50135 292 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 METAP2P50579 478 aaKnown RBP eCLIP3.74□□□□□ -1.81
TDP1-217ENST00000557782 HOXA4Q00056 320 aaPredicted RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 CDK3Q00526 305 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 FZD5Q13467 585 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 NEDD9Q14511 834 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SLC39A14Q15043 492 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 MEP1AQ16819 746 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 FAM174BQ3ZCQ3 159 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms