RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 NMBRP28336 390 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 PMLP29590 882 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 ARCN1P48444 511 aaKnown RBP13.49□□□□□ -0.25
SHMT2-234ENST00000557703 PRLHRP49683 370 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 NOVA1P51513 510 aaKnown RBP13.49□□□□□ -0.25
SHMT2-234ENST00000557703 RPA4Q13156 261 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 KIR2DS5Q14953 304 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 NR0B2Q15466 257 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 SPANXN3Q5MJ09 141 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 TMEM220Q6QAJ8 160 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 KDM7AQ6ZMT4 941 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 CHST15Q7LFX5 561 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-234ENST00000557703 ERMP1Q7Z2K6 904 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 C17orf82Q86X59 251 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-234ENST00000557703 RBM12BQ8IXT5 1001 aaKnown RBP13.49□□□□□ -0.25
SHMT2-234ENST00000557703 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 RASGEF1AQ8N9B8 481 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 FAM46DQ8NEK8 389 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 GPR156Q8NFN8 814 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 ART4Q93070 314 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 MFSD3Q96ES6 412 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 APOLD1Q96LR9 279 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 SUDS3Q9H7L9 328 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-234ENST00000557703 INTS10Q9NVR2 710 aaKnown RBP13.49□□□□□ -0.25
SHMT2-234ENST00000557703 TAAR2Q9P1P5 351 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 SLC2A6Q9UGQ3 507 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 MAD1L1Q9Y6D9 718 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 ZCWPW2A0A1B0GU75 182 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 PRR19A6NJB7 356 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 PRMT5O14744 637 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 KPNA5O15131 536 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 NUDT21O43809 227 aaKnown RBP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 DKK1O94907 266 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 FTH1P02794 183 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 GLB1P16278 677 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 IDSP22304 550 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 RPS3P23396 243 aaKnown RBP eCLIP13.48□□□□□ -0.256e-7■■□□□ 13.4
SHMT2-234ENST00000557703 ACTR1BP42025 376 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 ACTR1AP61163 376 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 CRADDP78560 199 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 DAB2P98082 770 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 DHX9Q08211 1270 aaKnown RBP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 C1orf61Q13536 156 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 THOC5Q13769 683 aaKnown RBP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 DBN1Q16643 649 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 CLPPQ16740 277 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 INSCQ1MX18 579 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 TYSND1Q2T9J0 566 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 DEFB133Q30KQ1 61 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 DNTTIP2Q5QJE6 756 aaKnown RBP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 PSAPL1Q6NUJ1 521 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 NEPROQ6NW34 567 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 ABRAXAS1Q6UWZ7 409 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 KIAA0408Q6ZU52 694 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 MARK2Q7KZI7 788 aaKnown RBP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 C11orf96Q7Z7L8 435 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 GALNT7Q86SF2 657 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 NRROSQ86YC3 692 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 ZNF547Q8IVP9 402 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 PIANPQ8IYJ0 282 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 DEFB124Q8NES8 71 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 OR2L2Q8NH16 312 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 ZFPM2Q8WW38 1151 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 SH3KBP1Q96B97 665 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 CCM2Q9BSQ5 444 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 FAM167BQ9BTA0 163 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 LRRC1Q9BTT6 524 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 TRIM31Q9BZY9 425 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 DPEP2Q9H4A9 486 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 STN1Q9H668 368 aaKnown RBP13.48□□□□□ -0.25
SHMT2-234ENST00000557703 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 PCDHB1Q9Y5F3 818 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 COMMD10Q9Y6G5 202 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 TEX264Q9Y6I9 313 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 PIKFYVEQ9Y2I7 2098 aa13.48□□□□□ -0.25
SHMT2-234ENST00000557703 ZFC3H1O60293 1989 aaKnown RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 BHMG1C9JSJ3 638 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 LIN7AO14910 233 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 FFAR2O15552 330 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 MTX2O75431 263 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 NDUFS3O75489 264 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 SPAG6O75602 509 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 POP7O75817 140 aaKnown RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 F3P13726 295 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 ARNTP27540 789 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 GPR3P46089 330 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 FASLGP48023 281 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 B4GALNT1Q00973 533 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 CUL1Q13616 776 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 CRYMQ14894 314 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 BBS9Q3SYG4 887 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 KHDC1Q4VXA5 237 aaKnown RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 C14orf28Q4W4Y0 310 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 FNBP1LQ5T0N5 605 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 METRNLQ641Q3 311 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 IYDQ6PHW0 289 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms