RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 J3KR12 359 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 K7EPI3 171 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 PFDN6O15212 129 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 MOCS2O96007 188 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-232ENST00000557487 GGT1P19440 569 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 CTGFP29279 349 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 OCA2Q04671 838 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 ATP6AP1LQ52LC2 224 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 GPRIN3Q6ZVF9 776 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 NEK10Q6ZWH5 1172 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 SYVN1Q86TM6 617 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 SPATA2LQ8IUW3 424 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-232ENST00000557487 SLC15A4Q8N697 577 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 PJA1Q8NG27 643 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 ZNF382Q96SR6 550 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 MCOLN1Q9GZU1 580 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 TMLHEQ9NVH6 421 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 DNAJB9Q9UBS3 223 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 PCTPQ9UKL6 214 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 ANKRD36A6QL64 1941 aa16.12■□□□□ 0.17
SHMT2-232ENST00000557487 TMX2-CTNND1H3BSU7 103 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TFPTP0C1Z6 253 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TYMPP19971 482 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 PSMA3P25788 255 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 POLR2IP36954 125 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 PRMT2P55345 433 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 YBEYP58557 167 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 YBX1P67809 324 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 YWHAHQ04917 246 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 MTA1Q13330 715 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 IL18R1Q13478 541 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TIGD2Q4W5G0 525 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 C6orf136Q5SQH8 315 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TBPL2Q6SJ96 375 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 AFTPHQ6ULP2 937 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 PLEKHH3Q7Z736 793 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 MRPL10Q7Z7H8 261 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 MON1AQ86VX9 555 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 SPARTQ8N0X7 666 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 ATP6V0D2Q8N8Y2 350 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 SH3RF2Q8TEC5 729 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 GIPC2Q8TF65 315 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 S100ZQ8WXG8 99 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TMBIM1Q969X1 311 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 FUBP1Q96AE4 644 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TEX37Q96LM6 180 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 KLHL5Q96PQ7 755 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 HGH1Q9BTY7 390 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 ARHGAP39Q9C0H5 1083 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 HMG20AQ9NP66 347 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 MIOSQ9NXC5 875 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 SELENONQ9NZV5 590 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 CACNG4Q9UBN1 327 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 KCTD3Q9Y597 815 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 CLDN25C9JDP6 229 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 CCL22O00626 93 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 SYNCRIPO60506 623 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 FOXD2O60548 495 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 FUCA1P04066 466 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 ITIH1P19827 911 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 ELK4P28324 431 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 YAP1P46937 504 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 FCGRTP55899 365 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TBX4P57082 545 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 OR4D2P58180 307 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 MRPS6P82932 125 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 PWP1Q13610 501 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 OTUD3Q5T2D3 398 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 OVOS1Q6IE37 1185 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 GALNT18Q6P9A2 607 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 FBXO46Q6PJ61 603 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 DLEU7Q6UYE1 221 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 PDZD8Q8NEN9 1154 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 PROKR1Q8TCW9 393 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 PSMG2Q969U7 264 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 UROC1Q96N76 676 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TMEM74Q96NL1 305 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 CGREF1Q99674 301 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 RBM4BQ9BQ04 359 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 RBM4Q9BWF3 364 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 LHPPQ9H008 270 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 INTS7Q9NVH2 962 aaKnown RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 ATAD3AQ9NVI7 634 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 NLE1Q9NVX2 485 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-232ENST00000557487 SCML2Q9UQR0 700 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 PDE10AQ9Y233 779 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 TRPV2Q9Y5S1 764 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 SNX5Q9Y5X3 404 aa16.11■□□□□ 0.17
SHMT2-232ENST00000557487 ZFC3H1O60293 1989 aaKnown RBP16.1■□□□□ 0.17
SHMT2-232ENST00000557487 CASTOR2A6NHX0 329 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 G3V2T6 193 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 HAPLN1P10915 354 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-232ENST00000557487 HOXD10P28358 340 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 SHMT2P34897 504 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 SCNN1GP51170 649 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 PLA2G16P53816 162 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 SEMA3AQ14563 771 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 RFX4Q33E94 735 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms