RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ACTR5Q9H9F9 607 aaPredicted RBP9.18□□□□□ -0.94
NEDD1-211ENST00000557454 METTL14Q9HCE5 456 aaKnown RBP9.18□□□□□ -0.94
NEDD1-211ENST00000557454 SLC6A20Q9NP91 592 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 ABI3Q9P2A4 366 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 KCNN3Q9UGI6 736 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 FBXL4Q9UKA2 621 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 SMC3Q9UQE7 1217 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 ZANQ9Y493 2812 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 SPTBP11277 2137 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 AGPSO00116 658 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 CD46P15529 392 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 GNA15P30679 374 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 SPAM1P38567 509 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 LSM11P83369 360 aaKnown RBP eCLIP9.17□□□□□ -0.94
NEDD1-211ENST00000557454 DPTQ07507 201 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 DMPKQ09013 629 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 PTPRRQ15256 657 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 SEPT7Q16181 437 aaKnown RBP9.17□□□□□ -0.94
NEDD1-211ENST00000557454 PLA2G4EQ3MJ16 856 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 SLC25A52Q3SY17 297 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 ZCWPW2Q504Y3 356 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 DNTTIP2Q5QJE6 756 aaKnown RBP9.17□□□□□ -0.94
NEDD1-211ENST00000557454 IRAK1BP1Q5VVH5 260 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 PRAMEF13Q5VWM6 474 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 MLIPQ5VWP3 458 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 TSPAN33Q86UF1 283 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 TSEN2Q8NCE0 465 aaKnown RBP9.17□□□□□ -0.94
NEDD1-211ENST00000557454 C1orf131Q8NDD1 294 aaKnown RBP9.17□□□□□ -0.94
NEDD1-211ENST00000557454 SCAMP4Q969E2 229 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 AP2M1Q96CW1 435 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 TBC1D31Q96DN5 1066 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 RMND5BQ96G75 393 aaPredicted RBP9.17□□□□□ -0.94
NEDD1-211ENST00000557454 NSMCE3Q96MG7 304 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 TLR10Q9BXR5 811 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 MAGEB5Q9BZ81 275 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 ABCG8Q9H221 673 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 POT1Q9NUX5 634 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 OR12D3Q9UGF7 316 aa9.17□□□□□ -0.94
NEDD1-211ENST00000557454 UBA6A0AVT1 1052 aaPredicted RBP9.16□□□□□ -0.94
NEDD1-211ENST00000557454 NPIPB15A6NHN6 443 aaPredicted RBP9.16□□□□□ -0.94
NEDD1-211ENST00000557454 OR52A4PA6NMU1 304 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 LRIG2O94898 1065 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 CYP2A7P20853 494 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 UGT1A4P22310 534 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 ARG2P78540 354 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 NRG1Q02297 640 aaPredicted RBP9.16□□□□□ -0.94
NEDD1-211ENST00000557454 MFAP5Q13361 173 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 PLCL1Q15111 1095 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 STK38Q15208 465 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 PTPN20Q4JDL3 420 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF789Q5FWF6 425 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF385CQ66K41 422 aaPredicted RBP9.16□□□□□ -0.94
NEDD1-211ENST00000557454 ISLR2Q6UXK2 745 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 ACRBPQ8NEB7 543 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 OR1L3Q8NH93 324 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 MBD6Q96DN6 1003 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 TMX3Q96JJ7 454 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 KREMEN1Q96MU8 473 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 POLDIP3Q9BY77 421 aaKnown RBP9.16□□□□□ -0.94
NEDD1-211ENST00000557454 GTPBP4Q9BZE4 634 aaKnown RBP9.16□□□□□ -0.94
NEDD1-211ENST00000557454 PDFQ9HBH1 243 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 SLC40A1Q9NP59 571 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 C1GALT1Q9NS00 363 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 KLC4Q9NSK0 619 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 SOHLH2Q9NX45 425 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 LRFN1Q9P244 771 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 VPS18Q9P253 973 aa9.16□□□□□ -0.94
NEDD1-211ENST00000557454 SONP18583 2426 aaKnown RBP9.16□□□□□ -0.94
NEDD1-211ENST00000557454 PCM1Q15154 2024 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 DOCK10Q96BY6 2186 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 TRAV17A0A0B4J275 112 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 NKX2-6A6NCS4 301 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 PDZK1P1A8MUH7 402 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 TMEM150CB9EJG8 249 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 J3KR12 359 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 PSMD11O00231 422 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 HTRA2O43464 458 aaPredicted RBP9.15□□□□□ -0.94
NEDD1-211ENST00000557454 PRAMEF2O60811 474 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 CNOT3O75175 753 aaKnown RBP9.15□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF202O95125 648 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 CRYABP02511 175 aaKnown RBP9.15□□□□□ -0.94
NEDD1-211ENST00000557454 UMODP07911 640 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 UNGP13051 313 aaPredicted RBP9.15□□□□□ -0.94
NEDD1-211ENST00000557454 MSX1P28360 303 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 HOXC12P31275 282 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 FLT3P36888 993 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 CSNK1DP48730 415 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 TFF3Q07654 80 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 RAB6CQ53S08 254 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 TMTC4Q5T4D3 741 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 TRNP1Q6NT89 227 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 FBXO38Q6PIJ6 1188 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 ADGRD1Q6QNK2 874 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 C3P1Q6ZMU1 363 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 B4GALNT4Q76KP1 1039 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 AOPEPQ8N6M6 819 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 OR2Y1Q8NGV0 311 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 CPLX3Q8WVH0 158 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 SLC35C1Q96A29 364 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms