RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SLC1A5Q15758 541 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 LPAL2Q16609 132 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 CDONQ4KMG0 1287 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 Q75L30 129 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 UTP15Q8TED0 518 aaKnown RBP3.85□□□□□ -1.79
VRK1-207ENST00000557352 NR1H4Q96RI1 486 aaPredicted RBP3.85□□□□□ -1.79
VRK1-207ENST00000557352 TRPC7Q9HCX4 862 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 PCDHB16Q9NRJ7 776 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 RRN3Q9NYV6 651 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 OGFRQ9NZT2 677 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 PLCH2O75038 1416 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 DAPK1P53355 1430 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 MBD5Q9P267 1494 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 KDM5DQ9BY66 1539 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 UNC13BO14795 1591 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 KDM5CP41229 1560 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 DIP2BQ9P265 1576 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 PPRC1Q5VV67 1664 aaKnown RBP3.84□□□□□ -1.79
VRK1-207ENST00000557352 A0A087X002 238 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 CCDC196A0A1B0GTZ2 297 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 C1orf226A1L170 272 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 ANKRD66B4E2M5 251 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 PSMD14O00487 310 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 CRLF1O75462 422 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 ZNF821O75541 412 aaPredicted RBP3.84□□□□□ -1.79
VRK1-207ENST00000557352 WISP2O76076 250 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 NKX2-2O95096 273 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 MLYCDO95822 493 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 NR3C1P04150 777 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 MSH3P20585 1137 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 MCCP23508 829 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 NR2F2P24468 414 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 CCT5P48643 541 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 SPOCK1Q08629 439 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 TSSK4Q6SA08 328 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 GSTA5Q7RTV2 222 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 ART5Q96L15 291 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 SCLT1Q96NL6 688 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 RANBP17Q9H2T7 1088 aaKnown RBP3.84□□□□□ -1.79
VRK1-207ENST00000557352 ZBTB20Q9HC78 741 aaPredicted RBP3.84□□□□□ -1.79
VRK1-207ENST00000557352 C2orf42Q9NWW7 574 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 NAALADL1Q9UQQ1 740 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 RNF215Q9Y6U7 377 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 NAIPQ13075 1403 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 SETD5Q9C0A6 1442 aa3.84□□□□□ -1.79
VRK1-207ENST00000557352 CCDC141Q6ZP82 1450 aa3.84□□□□□ -1.8
VRK1-207ENST00000557352 ARHGAP5Q13017 1502 aa3.84□□□□□ -1.8
VRK1-207ENST00000557352 SYCP2Q9BX26 1530 aa3.84□□□□□ -1.8
VRK1-207ENST00000557352 KIDINS220Q9ULH0 1771 aa3.84□□□□□ -1.8
VRK1-207ENST00000557352 A0A0G2JNG1 304 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 RRN3P2A6NIE6 340 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 DUXAA6NLW8 204 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 BUD23O43709 281 aaKnown RBP3.83□□□□□ -1.8
VRK1-207ENST00000557352 MAP2K2P36507 400 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 CLK1P49759 484 aaKnown RBP3.83□□□□□ -1.8
VRK1-207ENST00000557352 CDC16Q13042 620 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 ITGA9Q13797 1035 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 KIR2DS5Q14953 304 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 CDC73Q6P1J9 531 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 INO80CQ6PI98 192 aaPredicted RBP3.83□□□□□ -1.8
VRK1-207ENST00000557352 GTSCR1Q86UQ5 136 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 LONP2Q86WA8 852 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 RDM1Q8NG50 284 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 OR1J2Q8NGS2 313 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 ST8SIA4Q92187 359 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 OXNAD1Q96HP4 312 aaPredicted RBP3.83□□□□□ -1.8
VRK1-207ENST00000557352 SIL1Q9H173 461 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 COPG2Q9UBF2 871 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 STK39Q9UEW8 545 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 KDM3AQ9Y4C1 1321 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 RTEL1-TNFRSF6BF6WH68 1400 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 ABCC5O15440 1437 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 PTPRKQ15262 1439 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 MAGI2Q86UL8 1455 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 NEO1Q92859 1461 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 IQGAP3Q86VI3 1631 aa3.83□□□□□ -1.8
VRK1-207ENST00000557352 RNF17Q9BXT8 1623 aaKnown RBP3.82□□□□□ -1.8
VRK1-207ENST00000557352 HECW2Q9P2P5 1572 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 ZMYM4Q5VZL5 1548 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 ZFYVE16Q7Z3T8 1539 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 DUOX2Q9NRD8 1548 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 NCOA1Q15788 1441 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 EIF3CLB5ME19 914 aaKnown RBP3.82□□□□□ -1.8
VRK1-207ENST00000557352 H0YIN7 160 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 JRKO75564 520 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 KCNK5O95279 499 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 TFAP2AP05549 437 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 EPHA8P29322 1005 aaPredicted RBP3.82□□□□□ -1.8
VRK1-207ENST00000557352 HOXA13P31271 388 aaPredicted RBP3.82□□□□□ -1.8
VRK1-207ENST00000557352 PDE1CQ14123 709 aaPredicted RBP3.82□□□□□ -1.8
VRK1-207ENST00000557352 TMEM187Q14656 261 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 ZFP69Q49AA0 526 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 NSUN5P2Q63ZY6 315 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 ZNF790Q6PG37 636 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 GBGT1Q8N5D6 347 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 ZNF473Q8WTR7 871 aaKnown RBP3.82□□□□□ -1.8
VRK1-207ENST00000557352 MMABQ96EY8 250 aaPredicted RBP3.82□□□□□ -1.8
VRK1-207ENST00000557352 SMC6Q96SB8 1091 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 ATOH8Q96SQ7 321 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 PSD2Q9BQI7 771 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms