RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 AHI1Q8N157 1196 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 Q8N1Y9 231 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 MARVELD2Q8N4S9 558 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 AADATQ8N5Z0 425 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 CCDC185Q8N715 623 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 PACRGLQ8N7B6 248 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 OR52K1Q8NGK4 314 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 DTX3LQ8TDB6 740 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 GDPD5Q8WTR4 605 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 STYXQ8WUJ0 223 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 WDR60Q8WVS4 1066 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 KBTBD7Q8WVZ9 684 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 LPPQ93052 612 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.1□□□□□ -1.43
CPSF2-205ENST00000556622 PPP1R14BQ96C90 147 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 ASB9Q96DX5 294 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 CEP295NLQ96MC4 621 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 SERPINB11Q96P15 392 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 CASD1Q96PB1 797 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 FAM193BQ96PV7 902 aaPredicted RBP6.1□□□□□ -1.43
CPSF2-205ENST00000556622 PANX3Q96QZ0 392 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 CYP2S1Q96SQ9 504 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 HOPXQ9BPY8 73 aaPredicted RBP6.1□□□□□ -1.43
CPSF2-205ENST00000556622 TBL1YQ9BQ87 522 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 SYT15Q9BQS2 421 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 MECRQ9BV79 373 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 LGR4Q9BXB1 951 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 YIPF3Q9GZM5 350 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 SYTL2Q9HCH5 934 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 CSNK1G1Q9HCP0 422 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 SMYD2Q9NRG4 433 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 GPATCH2LQ9NWQ4 482 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 SYBUQ9NX95 663 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 TMEM216Q9P0N5 145 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 MARCOQ9UEW3 520 aaPredicted RBP6.1□□□□□ -1.43
CPSF2-205ENST00000556622 RUVBL2Q9Y230 463 aaKnown RBP6.1□□□□□ -1.43
CPSF2-205ENST00000556622 POMPQ9Y244 141 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 AP3M1Q9Y2T2 418 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 DTNAQ9Y4J8 743 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 MRPL42Q9Y6G3 142 aaKnown RBP6.1□□□□□ -1.43
CPSF2-205ENST00000556622 ANK1P16157 1881 aa6.1□□□□□ -1.43
CPSF2-205ENST00000556622 CITO14578 2027 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 C15orf38-AP3S2A0A0A6YYH1 394 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ZCWPW2A0A1B0GU75 182 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SYCE1LA8MT33 242 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 C5orf67F2Z3F1 127 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 PDLIM1O00151 329 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 AGRPO00253 132 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 IFRD1O00458 451 aaPredicted RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 TRIM38O00635 465 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 GRM6O15303 877 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SLC7A4O43246 635 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 CSPG5O95196 566 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 CLPTM1O96005 669 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 EPOP01588 193 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ALDH2P05091 517 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 LTA4HP09960 611 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 PABPC4LP0CB38 370 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ERVK-10P10266 1014 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 TYMPP19971 482 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 IL10P22301 178 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 MLH1P40692 756 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ALDH1A3P47895 512 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ALDH7A1P49419 539 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 NUDT2P50583 147 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SCNN1GP51170 649 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 EPHB1P54762 984 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 NR1H2P55055 460 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 MAP3K7CLP57077 242 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 YBEYP58557 167 aaPredicted RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SRSF3P84103 164 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 FOXM1Q08050 763 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 MAP4K2Q12851 820 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 BNIP2Q12982 314 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SEMA3BQ13214 749 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 NFE2Q16621 373 aaPredicted RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 GRAMD1BQ3KR37 738 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 NOMO2Q5JPE7 1267 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 OGFRL1Q5TC84 451 aaPredicted RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 NXNQ6DKJ4 435 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 OR52E8Q6IFG1 317 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 RFWD3Q6PCD5 774 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 CLEC20AQ6ZU45 233 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ARPINQ7Z6K5 226 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 MRPL10Q7Z7H8 261 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ZC3HC1Q86WB0 502 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 NUP93Q8N1F7 819 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 PQLC1Q8N2U9 271 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 MPP5Q8N3R9 675 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 LEMD2Q8NC56 503 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 NETO2Q8NC67 525 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SPPL3Q8TCT6 385 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ZNF483Q8TF39 744 aaPredicted RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 MRPL38Q96DV4 380 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SENP8Q96LD8 212 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 AGAP3Q96P47 875 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 OSBPL11Q9BXB4 747 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 B3GNT5Q9BYG0 378 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 MRPS26Q9BYN8 205 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 RHOBTB2Q9BYZ6 727 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms