RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 MMEL1Q495T6 779 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ANKRD20A4Q4UJ75 823 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 PLEKHG4Q58EX7 1191 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 RABGAP1LQ5R372 815 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 PRAMEF9Q5VWM5 478 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 METTL21CQ5VZV1 264 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SEL1L3Q68CR1 1132 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 NCBP2-AS2Q69YL0 99 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 NOTUMQ6P988 496 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SLC27A1Q6PCB7 646 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 Q6ZRM9 215 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CDHR3Q6ZTQ4 885 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 RFX8Q6ZV50 586 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CYS1Q717R9 158 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF627Q7L945 461 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CATSPER4Q7RTX7 472 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ACOT1Q86TX2 421 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 LCA5Q86VQ0 697 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 MYLK4Q86YV6 388 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 GALNT15Q8N3T1 639 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 LILRB2Q8N423 598 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ARFGAP1Q8N6T3 406 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 C7orf31Q8N865 590 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 TDRD5Q8NAT2 981 aaKnown RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ACTRT2Q8TDY3 377 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 RNF139Q8WU17 664 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 WDR60Q8WVS4 1066 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 TRAPPC12Q8WVT3 735 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 HERVK_113Q902F9 699 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ST8SIA2Q92186 375 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CCDC124Q96CT7 223 aaKnown RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 PRR11Q96HE9 360 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF668Q96K58 619 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 AGAP3Q96P47 875 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CSPG4P5Q96PW8 444 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 PANX3Q96QZ0 392 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 TSPAN18Q96SJ8 248 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 AGAP2Q99490 1192 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 FDXACB1Q9BRP7 624 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 MED10Q9BTT4 135 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 TRIM62Q9BVG3 475 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 BRD8Q9H0E9 1235 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ENKD1Q9H0I2 346 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CDH19Q9H159 772 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 OSBPL2Q9H1P3 480 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SUDS3Q9H7L9 328 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 KCNK13Q9HB14 408 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 LRRC4Q9HBW1 653 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 PTPRHQ9HD43 1115 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 VTA1Q9NP79 307 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SLC2A4RGQ9NR83 387 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SNX15Q9NRS6 342 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 HACD3Q9P035 362 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 C6orf203Q9P0P8 240 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SLC7A8Q9UHI5 535 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 TLK1Q9UKI8 766 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 UBQLN1Q9UMX0 589 aaKnown RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CDYLQ9Y232 598 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 DTNAQ9Y4J8 743 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 RPS6KL1Q9Y6S9 549 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 DCHS1Q96JQ0 3298 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ATRXP46100 2492 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 SYNJ2BP-COX16A0A087WUM0 186 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 A0A096LPK6 155 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 SMIM31A0A1B0GVY4 71 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ARHGAP10A1A4S6 786 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 GRXCR1A8MXD5 290 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 F5H423 210 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 XPO1O14980 1071 aaKnown RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CREB3O43889 395 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TSPAN1O60635 241 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 LYPLA1O75608 230 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PDE5AO76074 875 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 USP1O94782 785 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ALDH1A2O94788 518 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 METTL18O95568 372 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 VTNP04004 478 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 LGALS2P05162 132 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CLTBP09497 229 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 FGF3P11487 239 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 UQCRBP14927 111 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ALOX15P16050 662 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 GOT1P17174 413 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ARF4P18085 180 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 POU3F2P20265 443 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CD40P25942 277 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PSMB4P28070 264 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 AXLP30530 894 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ADSLP30566 484 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PPARGP37231 505 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 MATKP42679 507 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 MAGEA3P43357 314 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 GLUD2P49448 558 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TAF6P49848 677 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CLCN2P51788 898 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 HDAC4P56524 1084 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ILF2Q12905 390 aaKnown RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 MPP3Q13368 585 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ART3Q13508 389 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ITGA9Q13797 1035 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms