RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 IYDQ6PHW0 289 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 IGF2-ASQ6U949 168 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 C4orf22Q6V702 233 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 C11orf96Q7Z7L8 435 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 B3GNT8Q7Z7M8 397 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 SLC35F6Q8N357 371 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 RASGEF1CQ8N431 466 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 PRELID2Q8N945 189 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 GLIS1Q8NBF1 620 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 ULK4Q96C45 1275 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 ATXN7L3BQ96GX2 97 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 ZNF514Q96K75 400 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-205ENST00000556310 PBKQ96KB5 322 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 DNAJC1Q96KC8 554 aaKnown RBP11.36□□□□□ -0.59
SLIRP-205ENST00000556310 TMEM74Q96NL1 305 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 SPSB2Q99619 263 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 ASB8Q9H765 288 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 POLR1BQ9H9Y6 1135 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 SARS2Q9NP81 518 aaKnown RBP11.36□□□□□ -0.59
SLIRP-205ENST00000556310 EIF2B3Q9NR50 452 aaKnown RBP11.36□□□□□ -0.59
SLIRP-205ENST00000556310 SLC23A2Q9UGH3 650 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 CRLS1Q9UJA2 301 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 LAMA5O15230 3695 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 CHD6Q8TD26 2715 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 PIKFYVEQ9Y2I7 2098 aa11.36□□□□□ -0.59
SLIRP-205ENST00000556310 URB1O60287 2271 aaKnown RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 PPM1DO15297 605 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 KIF5CO60282 957 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 SNX2O60749 519 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 KCNJ13O60928 360 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 CPNE6O95741 557 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 GAS8O95995 478 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 MPOP05164 745 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 APRTP07741 180 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 TPH1P17752 444 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 MSH3P20585 1137 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 PSMA3P25788 255 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 ALDH4A1P30038 563 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 RPL22P35268 128 aaKnown RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 LMAN1P49257 510 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 CTSCP53634 463 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 OR1D5P58170 312 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 TMPRSS15P98073 1019 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 HHEXQ03014 270 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 DMPKQ09013 629 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 EIF3IQ13347 325 aaKnown RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 TBC1D25Q3MII6 688 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 GPR33Q49SQ1 333 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 C3orf38Q5JPI3 329 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 AGAP9Q5VTM2 703 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 PPP1R21Q6ZMI0 780 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 SNX20Q7Z614 316 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 PRUNE1Q86TP1 453 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 SLC9B2Q86UD5 537 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 SLITRK4Q8IW52 837 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 LSMEM2Q8N112 164 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 NXPE1Q8N323 547 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 RASGEF1AQ8N9B8 481 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 DNAAF3Q8N9W5 541 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 OR52K1Q8NGK4 314 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 WDR36Q8NI36 951 aaKnown RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 SNIP1Q8TAD8 396 aaKnown RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 STYXQ8WUJ0 223 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 NAP1L3Q99457 506 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 FOXP3Q9BZS1 431 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 STRADBQ9C0K7 418 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 EPB41L5Q9HCM4 733 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 PRDM8Q9NQV8 689 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 NLE1Q9NVX2 485 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 PIH1D1Q9NWS0 290 aaKnown RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 ATXN7L1Q9ULK2 861 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 TTC7AQ9ULT0 858 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-205ENST00000556310 SATB2Q9UPW6 733 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 DNAJC16Q9Y2G8 782 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 RAXQ9Y2V3 346 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 PCDHGA8Q9Y5G5 932 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 SLC30A1Q9Y6M5 507 aa11.35□□□□□ -0.59
SLIRP-205ENST00000556310 IGHV1OR21-1A0A087WYE8 117 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 TRBV5-4A0A0C4DH59 114 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 A0A1W2PNU3 283 aaPredicted RBP11.34□□□□□ -0.59
SLIRP-205ENST00000556310 KLHL33A6NCF5 533 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 MROH6A6NGR9 719 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 OR2AG2A6NM03 316 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 PDZK1P1A8MUH7 402 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 PGRMC1O00264 195 aaKnown RBP11.34□□□□□ -0.59
SLIRP-205ENST00000556310 CCL22O00626 93 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 B4GAT1O43505 415 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 ZSCAN5DPP0CG00 497 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 RALBP11234 206 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 MC4RP32245 332 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 KCNJ1P48048 391 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 UBE2IP63279 158 aaKnown RBP11.34□□□□□ -0.59
SLIRP-205ENST00000556310 GPLD1P80108 840 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 ZFP36L1Q07352 338 aaKnown RBP11.34□□□□□ -0.59
SLIRP-205ENST00000556310 SQSTM1Q13501 440 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 LAMB3Q13751 1172 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 AMZ1Q400G9 498 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 ABRAXAS1Q6UWZ7 409 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 WASH2PQ6VEQ5 465 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 GSTA5Q7RTV2 222 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms