RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 FASTKD5Q7L8L6 764 aaKnown RBP2.96□□□□□ -1.94
SCFD1-218ENST00000556256 TDRPQ86YL5 185 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 ARHGAP12Q8IWW6 846 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 SLC35F3Q8IY50 421 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 GTF3C6Q969F1 213 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 FBXL8Q96CD0 374 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 MMABQ96EY8 250 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-218ENST00000556256 PPP1R13BQ96KQ4 1090 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 BBS4Q96RK4 519 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 BARD1Q99728 777 aaKnown RBP2.96□□□□□ -1.94
SCFD1-218ENST00000556256 SYT11Q9BT88 431 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 GHITMQ9H3K2 345 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 SLC6A13Q9NSD5 602 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 HAO1Q9UJM8 370 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 FAM96BQ9Y3D0 163 aa2.96□□□□□ -1.94
SCFD1-218ENST00000556256 LSM4Q9Y4Z0 139 aaKnown RBP2.96□□□□□ -1.94
SCFD1-218ENST00000556256 UTYO14607 1347 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 PCNX3Q9H6A9 2034 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 RUSC2Q8N2Y8 1516 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 TTC36A6NLP5 189 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 AGAP14A8MT82 685 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 A8MZ25 164 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 HMGB1P1B2RPK0 211 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 SNAP23O00161 211 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 SEC14L5O43304 696 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 MMP2P08253 660 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 ETFAP13804 333 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 RRM1P23921 792 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 ARL3P36405 182 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 UBA7P41226 1012 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 ARF3P61204 181 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 ARF1P84077 181 aaKnown RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 CEBPZQ03701 1054 aaKnown RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 NIPAL4Q0D2K0 466 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 PRKG2Q13237 762 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 TUBB2AQ13885 445 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 PPP2R5BQ15173 497 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 DPCR1Q3MIW9 517 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 ZC2HC1CQ53FD0 456 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 SOWAHCQ53LP3 525 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 CXorf66Q5JRM2 361 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 TTI2Q6NXR4 508 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 LINGO2Q7L985 606 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 WDTC1Q8N5D0 677 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 FRMD1Q8N878 549 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 OR52I2Q8NH67 350 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 ARHGEF2Q92974 986 aaKnown RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 NSUN4Q96CB9 384 aaKnown RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 SLC41A2Q96JW4 573 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 C18orf12Q96KH6 178 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 WDFY2Q96P53 400 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 ZNF300Q96RE9 604 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 SIN3AQ96ST3 1273 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 FAM110AQ9BQ89 295 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 TRIM51Q9BSJ1 452 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 TUBB2BQ9BVA1 445 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 POLR1BQ9H9Y6 1135 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 MAGEE1Q9HCI5 957 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 INTS10Q9NVR2 710 aaKnown RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 TERF2IPQ9NYB0 399 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 EHD2Q9NZN4 543 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 LOXL2Q9Y4K0 774 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 LAS1LQ9Y4W2 734 aaKnown RBP2.95□□□□□ -1.94
SCFD1-218ENST00000556256 LYVE1Q9Y5Y7 322 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 STON1Q9Y6Q2 735 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 SMCHD1A6NHR9 2005 aa2.95□□□□□ -1.94
SCFD1-218ENST00000556256 FAM237BA0A1B0GVD1 139 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 BCAT2O15382 392 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 ZNHIT1O43257 154 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 CTSVO60911 334 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 GFPT2O94808 682 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 OR2C1O95371 312 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 CYC1P08574 325 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 BDKRB2P30411 391 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 PSMB10P40306 273 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 HADHAP40939 763 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 GARSP41250 739 aaKnown RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 NAP1L1P55209 391 aaKnown RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 SPOCK1Q08629 439 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 FOXD4Q12950 439 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 ENPP2Q13822 863 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 COL28A1Q2UY09 1125 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 USP41Q3LFD5 358 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 C6orf141Q5SZD1 244 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 WDR78Q5VTH9 848 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 HIST2H2BDQ6DRA6 164 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 ITPRIPL1Q6GPH6 555 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 OR7E24Q6IFN5 339 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 FBXO46Q6PJ61 603 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 TSSK4Q6SA08 328 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 SARM1Q6SZW1 724 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 IKBIPQ70UQ0 350 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 ERC1Q8IUD2 1116 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 ZCCHC9Q8N567 271 aaKnown RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 BEST2Q8NFU1 509 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 HUS1BQ8NHY5 278 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 PIGTQ969N2 578 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 ARHGEF26Q96DR7 871 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 LINGO1Q96FE5 620 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 SENP5Q96HI0 755 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms