RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PYCR3Q53H96 274 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 TPRG1LQ5T0D9 272 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 ADGRD1Q6QNK2 874 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 IL27RAQ6UWB1 636 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 LRIG3Q6UXM1 1119 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 TAOK1Q7L7X3 1001 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 LRRTM4Q86VH4 590 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 SPATS2Q86XZ4 545 aaKnown RBP12.29□□□□□ -0.44
SHMT2-221ENST00000555773 TDRPQ86YL5 185 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 TRAPPC5Q8IUR0 188 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 CLDN19Q8N6F1 224 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 OR1E3Q8WZA6 343 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 PAFAH2Q99487 392 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 RBBP8Q99708 897 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 CCM2Q9BSQ5 444 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 AARSD1Q9BTE6 412 aaKnown RBP12.29□□□□□ -0.44
SHMT2-221ENST00000555773 ARRDC1-AS1Q9H2J1 176 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 CARS2Q9HA77 564 aaKnown RBP12.29□□□□□ -0.44
SHMT2-221ENST00000555773 CAPN10Q9HC96 672 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 CYP4F12Q9HCS2 524 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 FGF22Q9HCT0 170 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 LATS2Q9NRM7 1088 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 TRNAU1APQ9NX07 287 aaKnown RBP12.29□□□□□ -0.44
SHMT2-221ENST00000555773 KLHL42Q9P2K6 505 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 SLC17A6Q9P2U8 582 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 ZNHIT2Q9UHR6 403 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 MOSPD1Q9UJG1 213 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 SUFUQ9UMX1 484 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 PRSS21Q9Y6M0 314 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 KNL1Q8NG31 2342 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 GPR179Q6PRD1 2367 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 OR2AG2A6NM03 316 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 SGTAO43765 313 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 POP7O75817 140 aaKnown RBP12.28□□□□□ -0.44
SHMT2-221ENST00000555773 KRT37O76014 449 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 SHBGP04278 402 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 CFIP05156 583 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 SYPP08247 313 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 VCLP18206 1134 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 CHRM3P20309 590 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 MPLP40238 635 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 RXRGP48443 463 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 CTSCP53634 463 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 POU4F1Q01851 419 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 PLOD1Q02809 727 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-221ENST00000555773 DNAJC3Q13217 504 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 EFTUD2Q15029 972 aaKnown RBP eCLIP12.28□□□□□ -0.448e-9■■■■■ 30.8
SHMT2-221ENST00000555773 KIF19Q2TAC6 998 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 CTSL3PQ5NE16 218 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 PLA2G2CQ5R387 149 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 FAM45BPQ6NSW5 357 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 UGT3A1Q6NUS8 523 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 ZNF549Q6P9A3 640 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 FBXO38Q6PIJ6 1188 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 DET1Q7L5Y6 550 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 HDXQ7Z353 690 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 AMZ2Q86W34 360 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 HID1Q8IV36 788 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 ZNF547Q8IVP9 402 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 SDR16C5Q8N3Y7 309 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 FAM45AQ8TCE6 357 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 DCAKDQ8WVC6 231 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 KCNJ9Q92806 393 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 TSACCQ96A04 125 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-221ENST00000555773 MTBPQ96DY7 904 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 MRRFQ96E11 262 aaKnown RBP12.28□□□□□ -0.44
SHMT2-221ENST00000555773 VPS39Q96JC1 886 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 TIMM29Q9BSF4 260 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 NUSAP1Q9BXS6 441 aaKnown RBP12.28□□□□□ -0.44
SHMT2-221ENST00000555773 SLC13A1Q9BZW2 595 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 SPATS2LQ9NUQ6 558 aaKnown RBP12.28□□□□□ -0.44
SHMT2-221ENST00000555773 TAS2R13Q9NYV9 303 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 GMEB2Q9UKD1 530 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 PLAAQ9Y263 795 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 HCN4Q9Y3Q4 1203 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 GPSM3Q9Y4H4 160 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 NFS1Q9Y697 457 aa12.28□□□□□ -0.44
SHMT2-221ENST00000555773 ATXN2Q99700 1313 aaKnown RBP12.28□□□□□ -0.44
SHMT2-221ENST00000555773 IQANK1A0A1B0GTG1 560 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 MGAT4DA6NG13 374 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 E5RI56 91 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 H3BM21 787 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 RASGRF2O14827 1237 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 KHNYNO15037 678 aaKnown RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 CDH16O75309 829 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 VPS26AO75436 327 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 FAM155BO75949 473 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 TRIM16O95361 564 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 LMNAP02545 664 aaKnown RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 ITGA2BP08514 1039 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 SNRPAP09012 282 aaKnown RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 NME1P15531 152 aaKnown RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 JUNDP17535 347 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 GCAP28676 217 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 GNPDA1P46926 289 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 ARRB1P49407 418 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 CLCNKAP51800 687 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 SLC12A2P55011 1212 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms