RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 XKR5Q6UX68 686 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 TMEM26Q6ZUK4 368 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 GDAP1Q8TB36 358 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 SLC35B2Q8TB61 432 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 ZNF398Q8TD17 642 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 HEXDCQ8WVB3 486 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 USP7Q93009 1102 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 BBC3Q96PG8 261 aaPredicted RBP11.65□□□□□ -0.54
VRK1-204ENST00000555351 ZPBPQ9BS86 351 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 RAB33BQ9H082 229 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 OSGEPL1Q9H4B0 414 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 PRDM8Q9NQV8 689 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 PCDHB11Q9Y5F2 797 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 TRBV23OR9-2A0A075B6M9 112 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 EIF4E1BA6NMX2 242 aaKnown RBP11.64□□□□□ -0.55
VRK1-204ENST00000555351 STMND1H3BQB6 276 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 KRT86O43790 486 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 VIPP01282 170 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 C9P02748 559 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
VRK1-204ENST00000555351 STIP1P31948 543 aaKnown RBP11.64□□□□□ -0.55
VRK1-204ENST00000555351 HALP42357 657 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 MAPK10P53779 464 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 MC2RQ01718 297 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 NFATC2Q13469 925 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 LONRF2Q1L5Z9 754 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 P3H1Q32P28 736 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 ZNF648Q5T619 568 aaPredicted RBP11.64□□□□□ -0.55
VRK1-204ENST00000555351 GPRC6AQ5T6X5 926 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 KCTD11Q693B1 232 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 DENND5AQ6IQ26 1287 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 CRTC3Q6UUV7 619 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 FAM151BQ6UXP7 276 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 AMZ2Q86W34 360 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 TRAPPC5Q8IUR0 188 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 TRIM48Q8IWZ4 208 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 BEND7Q8N7W2 519 aaPredicted RBP11.64□□□□□ -0.55
VRK1-204ENST00000555351 BMPERQ8N8U9 685 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 CCDC110Q8TBZ0 833 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 ZFPM2Q8WW38 1151 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 RTP4Q96DX8 246 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 C10orf88Q9H8K7 445 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 CPNE5Q9HCH3 593 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 SLC40A1Q9NP59 571 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 ARFGAP3Q9NP61 516 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 FBXO8Q9NRD0 319 aa11.64□□□□□ -0.55
VRK1-204ENST00000555351 ZNF624Q9P2J8 865 aaPredicted RBP11.64□□□□□ -0.55
VRK1-204ENST00000555351 ERI2A8K979 691 aaKnown RBP11.63□□□□□ -0.55
VRK1-204ENST00000555351 PDZK1P1A8MUH7 402 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 H7C0S8 307 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 ARHGAP6O43182 974 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 UGT1A9O60656 530 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 MTX2O75431 263 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 SRP72O76094 671 aaKnown RBP11.63□□□□□ -0.55
VRK1-204ENST00000555351 PRAMEF1O95521 474 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 CCL4P13236 92 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 BRAFP15056 766 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 UGT1A6P19224 532 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 UGT1A1P22309 533 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 UGT1A4P22310 534 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 UGT1A3P35503 534 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 SLC19A1P41440 591 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 XIAPP98170 497 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 GPR33Q49SQ1 333 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 DCAF12Q5T6F0 453 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 ARHGAP40Q5TG30 622 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 METRNLQ641Q3 311 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 AADACL2Q6P093 401 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 ZNF662Q6ZS27 426 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 ARHGEF18Q6ZSZ5 1173 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 RASGEF1AQ8N9B8 481 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 RCBTB1Q8NDN9 531 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 OR4K2Q8NGD2 314 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 NCSTNQ92542 709 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 ULK4Q96C45 1275 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 LINC00615Q96LM1 132 aaPredicted RBP11.63□□□□□ -0.55
VRK1-204ENST00000555351 TBL1YQ9BQ87 522 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 DESI2Q9BSY9 194 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 LRRC40Q9H9A6 602 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 UGT1A7Q9HAW7 530 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 UGT1A10Q9HAW8 530 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 UGT1A8Q9HAW9 530 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 SLC39A1Q9NY26 324 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 FOXJ2Q9P0K8 574 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 SCHIP1Q9P0W5 487 aaPredicted RBP11.63□□□□□ -0.55
VRK1-204ENST00000555351 TRIM10Q9UDY6 481 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 EPHA6Q9UF33 1036 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 ACSL5Q9ULC5 683 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 ARL5AQ9Y689 179 aa11.63□□□□□ -0.55
VRK1-204ENST00000555351 F5H423 210 aaPredicted RBP11.62□□□□□ -0.55
VRK1-204ENST00000555351 POP7O75817 140 aaKnown RBP11.62□□□□□ -0.55
VRK1-204ENST00000555351 UBXN7O94888 489 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 FTCDO95954 541 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 ITGB2P05107 769 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 GSTM1P09488 218 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 RALBP11234 206 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 MSH3P20585 1137 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 PSMA3P25788 255 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms