RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 MAP4K5Q9Y4K4 846 aa12.87□□□□□ -0.35
XRCC3-212ENST00000555231 UNC79Q9P2D8 2635 aa12.87□□□□□ -0.35
XRCC3-212ENST00000555231 MYO9AB2RTY4 2548 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 GPR89AB7ZAQ6 455 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 GPR89BP0CG08 455 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 BPIP17213 487 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 COL8A1P27658 744 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 PTPN4P29074 926 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 ZBTB17Q13105 803 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 PCSK7Q16549 785 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 UGT8Q16880 541 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 EIF2S3LQ2VIR3 472 aaKnown RBP12.86□□□□□ -0.35
XRCC3-212ENST00000555231 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 PQLC3Q8N755 202 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 SLC41A2Q96JW4 573 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 TRIB3Q96RU7 358 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 MAP3K3Q99759 626 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 ADGRE3Q9BY15 652 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 MFRPQ9BY79 579 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 GPR63Q9BZJ6 419 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 BPIFA1Q9NP55 256 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 TMPRSS11EQ9UL52 423 aa12.86□□□□□ -0.35
XRCC3-212ENST00000555231 MYO1FO00160 1098 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 VEGFDO43915 354 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 SORBS2O94875 1100 aaKnown RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 PTGIRP43119 386 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 TAS2R40P59535 323 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 DCDC1P59894 354 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 RPS15P62841 145 aaKnown RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 MRPL49Q13405 166 aaKnown RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 INPP5JQ15735 1006 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 AGAP9Q5VTM2 703 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 HGSNATQ68CP4 663 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 ZNF787Q6DD87 383 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 CYB5D1Q6P9G0 228 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 WASH2PQ6VEQ5 465 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 C11orf96Q7Z7L8 435 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 SYVN1Q86TM6 617 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 RBM12BQ8IXT5 1001 aaKnown RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 GDAP1Q8TB36 358 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 THAP4Q8WY91 577 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 UBXN4Q92575 508 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 MR1Q95460 341 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 HDAC11Q96DB2 347 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 ZNF670Q9BS34 389 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 GPR87Q9BY21 358 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 RAB33BQ9H082 229 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 ING2Q9H160 280 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 WASH6PQ9NQA3 447 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 FGF21Q9NSA1 209 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 MAP10Q9P2G4 905 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 NFKBIL1Q9UBC1 381 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 PSMD13Q9UNM6 376 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 FARSAQ9Y285 508 aaKnown RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 PCDHGA9Q9Y5G4 932 aaKnown RBP12.85□□□□□ -0.35
XRCC3-212ENST00000555231 SPTBP11277 2137 aa12.85□□□□□ -0.35
XRCC3-212ENST00000555231 HIVEP3Q5T1R4 2406 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 TCP11X1B4DZS4 312 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 AURKAO14965 403 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 DDX3YO15523 660 aaKnown RBP12.84□□□□□ -0.35
XRCC3-212ENST00000555231 CYP1A2P05177 515 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 MX2P20592 715 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 FECHP22830 423 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 HALP42357 657 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 ARL4DP49703 201 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 ACY1Q03154 408 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 TMEM115Q12893 351 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-212ENST00000555231 GPS2Q13227 327 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 LAMB3Q13751 1172 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 PLCL1Q15111 1095 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 GPR19Q15760 415 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 ATP13A5Q4VNC0 1218 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 ZFYVE27Q5T4F4 411 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 PDPK2PQ6A1A2 396 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 FBXO38Q6PIJ6 1188 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 SEC14L1Q92503 715 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 ZNF514Q96K75 400 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-212ENST00000555231 MAGEE1Q9HCI5 957 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 MLXIPLQ9NP71 852 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 RAD18Q9NS91 495 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 SPO11Q9Y5K1 396 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 CREBBPQ92793 2442 aa12.84□□□□□ -0.35
XRCC3-212ENST00000555231 A0A087X0T9 212 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 UBA6A0AVT1 1052 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-212ENST00000555231 SCRG1O75711 98 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 FAM228BP0C875 321 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 VCLP18206 1134 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 IFI35P80217 286 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-212ENST00000555231 PDE1BQ01064 536 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 CDK18Q07002 472 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 PPIDQ08752 370 aaKnown RBP12.83□□□□□ -0.36
XRCC3-212ENST00000555231 AP1B1Q10567 949 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 GTF2H3Q13889 308 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 PDK2Q15119 407 aa12.83□□□□□ -0.36
XRCC3-212ENST00000555231 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms