RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CDYLQ9Y232 598 aa8.79□□□□□ -1
TDP1-210ENST00000554976 EDDM13A0A1B0GTR0 161 aa8.79□□□□□ -1
TDP1-210ENST00000554976 H0Y858 1186 aa8.79□□□□□ -1
TDP1-210ENST00000554976 PSMD11O00231 422 aa8.79□□□□□ -1
TDP1-210ENST00000554976 PFDN6O15212 129 aa8.79□□□□□ -1
TDP1-210ENST00000554976 SLC22A2O15244 555 aa8.79□□□□□ -1
TDP1-210ENST00000554976 TAPBPO15533 448 aa8.79□□□□□ -1
TDP1-210ENST00000554976 CDK14O94921 469 aa8.79□□□□□ -1
TDP1-210ENST00000554976 SIX3O95343 332 aaPredicted RBP8.79□□□□□ -1
TDP1-210ENST00000554976 CYP2A6P11509 494 aaPredicted RBP8.79□□□□□ -1
TDP1-210ENST00000554976 ITGB7P26010 798 aa8.79□□□□□ -1
TDP1-210ENST00000554976 ALDH18A1P54886 795 aaKnown RBP8.79□□□□□ -1
TDP1-210ENST00000554976 RIPK1Q13546 671 aa8.79□□□□□ -1
TDP1-210ENST00000554976 RUNX3Q13761 415 aa8.79□□□□□ -1
TDP1-210ENST00000554976 PTK2BQ14289 1009 aa8.79□□□□□ -1
TDP1-210ENST00000554976 C2orf27AQ580R0 203 aa8.79□□□□□ -1
TDP1-210ENST00000554976 SH2D4BQ5SQS7 431 aa8.79□□□□□ -1
TDP1-210ENST00000554976 SEL1L3Q68CR1 1132 aa8.79□□□□□ -1
TDP1-210ENST00000554976 UGT3A1Q6NUS8 523 aa8.79□□□□□ -1
TDP1-210ENST00000554976 CYB5D1Q6P9G0 228 aa8.79□□□□□ -1
TDP1-210ENST00000554976 PARM1Q6UWI2 310 aa8.79□□□□□ -1
TDP1-210ENST00000554976 TRAM1L1Q8N609 369 aa8.79□□□□□ -1
TDP1-210ENST00000554976 ZNF366Q8N895 744 aa8.79□□□□□ -1
TDP1-210ENST00000554976 DDHD1Q8NEL9 900 aa8.79□□□□□ -1
TDP1-210ENST00000554976 ACTRT2Q8TDY3 377 aa8.79□□□□□ -1
TDP1-210ENST00000554976 UBTD2Q8WUN7 234 aa8.79□□□□□ -1
TDP1-210ENST00000554976 DLG3Q92796 817 aa8.79□□□□□ -1
TDP1-210ENST00000554976 PHF21BQ96EK2 531 aa8.79□□□□□ -1
TDP1-210ENST00000554976 TUBB6Q9BUF5 446 aa8.79□□□□□ -1
TDP1-210ENST00000554976 APOL5Q9BWW9 433 aa8.79□□□□□ -1
TDP1-210ENST00000554976 TBC1D10AQ9BXI6 508 aa8.79□□□□□ -1
TDP1-210ENST00000554976 CIPCQ9C0C6 399 aa8.79□□□□□ -1
TDP1-210ENST00000554976 IGFLR1Q9H665 355 aa8.79□□□□□ -1
TDP1-210ENST00000554976 TAS2R1Q9NYW7 299 aa8.79□□□□□ -1
TDP1-210ENST00000554976 TAGLN3Q9UI15 199 aa8.79□□□□□ -1
TDP1-210ENST00000554976 MYO7AQ13402 2215 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ANHXE9PGG2 379 aa8.78□□□□□ -1
TDP1-210ENST00000554976 AREL1O15033 823 aa8.78□□□□□ -1
TDP1-210ENST00000554976 LAMP2P13473 410 aa8.78□□□□□ -1
TDP1-210ENST00000554976 NSG1P42857 185 aa8.78□□□□□ -1
TDP1-210ENST00000554976 IL2P60568 153 aa8.78□□□□□ -1
TDP1-210ENST00000554976 KDSRQ06136 332 aa8.78□□□□□ -1
TDP1-210ENST00000554976 PCBP2Q15366 365 aaKnown RBP eCLIP8.78□□□□□ -17e-11■■■■■ 50.5
TDP1-210ENST00000554976 LIPIQ6XZB0 460 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CLDN19Q8N6F1 224 aa8.78□□□□□ -1
TDP1-210ENST00000554976 TIFAQ96CG3 184 aa8.78□□□□□ -1
TDP1-210ENST00000554976 KLHL29Q96CT2 875 aa8.78□□□□□ -1
TDP1-210ENST00000554976 BTBD10Q9BSF8 475 aa8.78□□□□□ -1
TDP1-210ENST00000554976 TUBB1Q9H4B7 451 aa8.78□□□□□ -1
TDP1-210ENST00000554976 WDR55Q9H6Y2 383 aaPredicted RBP8.78□□□□□ -1
TDP1-210ENST00000554976 SLC28A3Q9HAS3 691 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CNOT6Q9ULM6 557 aaKnown RBP8.78□□□□□ -1
TDP1-210ENST00000554976 OARD1Q9Y530 152 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ZFC3H1O60293 1989 aaKnown RBP8.78□□□□□ -1
TDP1-210ENST00000554976 A8MUI8 341 aa8.78□□□□□ -1
TDP1-210ENST00000554976 EIF3FO00303 357 aaPredicted RBP8.78□□□□□ -1
TDP1-210ENST00000554976 SMIM24O75264 130 aa8.78□□□□□ -1
TDP1-210ENST00000554976 PRR35P0CG20 571 aa8.78□□□□□ -1
TDP1-210ENST00000554976 AOAHP28039 575 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CCR7P32248 378 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ETV3P41162 512 aa8.78□□□□□ -1
TDP1-210ENST00000554976 IL12RB1P42701 662 aa8.78□□□□□ -1
TDP1-210ENST00000554976 MAGEA8P43361 318 aa8.78□□□□□ -1
TDP1-210ENST00000554976 FOXA1P55317 472 aa8.78□□□□□ -1
TDP1-210ENST00000554976 TGFBIQ15582 683 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ZXDCQ2QGD7 858 aaPredicted RBP8.78□□□□□ -1
TDP1-210ENST00000554976 TBC1D25Q3MII6 688 aa8.78□□□□□ -1
TDP1-210ENST00000554976 TMEM52BQ4KMG9 183 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ACSBG2Q5FVE4 666 aa8.78□□□□□ -1
TDP1-210ENST00000554976 TXNDC11Q6PKC3 985 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ZBTB2Q8N680 514 aa8.78□□□□□ -1
TDP1-210ENST00000554976 TMEM79Q9BSE2 394 aa8.78□□□□□ -1
TDP1-210ENST00000554976 RPP25Q9BUL9 199 aaKnown RBP8.78□□□□□ -1
TDP1-210ENST00000554976 NUF2Q9BZD4 464 aa8.78□□□□□ -1
TDP1-210ENST00000554976 SHCBP1LQ9BZQ2 653 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ZFP14Q9HCL3 533 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CD248Q9HCU0 757 aa8.78□□□□□ -1
TDP1-210ENST00000554976 TCF7L2Q9NQB0 619 aa8.78□□□□□ -1
TDP1-210ENST00000554976 GTSE1Q9NYZ3 720 aa8.78□□□□□ -1
TDP1-210ENST00000554976 NUDT4Q9NZJ9 180 aa8.78□□□□□ -1
TDP1-210ENST00000554976 PKD2L2Q9NZM6 624 aa8.78□□□□□ -1
TDP1-210ENST00000554976 LMCD1Q9NZU5 365 aa8.78□□□□□ -1
TDP1-210ENST00000554976 PTBP2Q9UKA9 531 aaKnown RBP8.78□□□□□ -1
TDP1-210ENST00000554976 EME2A4GXA9 379 aaPredicted RBP8.78□□□□□ -1
TDP1-210ENST00000554976 BTN3A1O00481 513 aa8.78□□□□□ -1
TDP1-210ENST00000554976 GSC2O15499 205 aa8.78□□□□□ -1
TDP1-210ENST00000554976 SLC25A14O95258 325 aaPredicted RBP8.78□□□□□ -1
TDP1-210ENST00000554976 CBSLP0DN79 551 aa8.78□□□□□ -1
TDP1-210ENST00000554976 POU3F3P20264 500 aaPredicted RBP8.78□□□□□ -1
TDP1-210ENST00000554976 EPHA3P29320 983 aa8.78□□□□□ -1
TDP1-210ENST00000554976 EEF1DP29692 281 aaKnown RBP8.78□□□□□ -1
TDP1-210ENST00000554976 CBSP35520 551 aa8.78□□□□□ -1
TDP1-210ENST00000554976 MRPL19P49406 292 aaKnown RBP8.78□□□□□ -1
TDP1-210ENST00000554976 AGTR2P50052 363 aa8.78□□□□□ -1
TDP1-210ENST00000554976 NAA20P61599 178 aa8.78□□□□□ -1
TDP1-210ENST00000554976 GRM2Q14416 872 aa8.78□□□□□ -1
TDP1-210ENST00000554976 GRIN2CQ14957 1233 aa8.78□□□□□ -1
TDP1-210ENST00000554976 PFKFB4Q16877 469 aa8.78□□□□□ -1
TDP1-210ENST00000554976 LARP4Q71RC2 724 aaKnown RBP eCLIP8.78□□□□□ -1
TDP1-210ENST00000554976 CYP2U1Q7Z449 544 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms