RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 FAM72AQ5TYM5 149 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 C9orf57Q5W0N0 161 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 FAM72DQ6L9T8 149 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 SYCE2Q6PIF2 218 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 GALNT7Q86SF2 657 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 KCNMB4Q86W47 210 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 FAM72BQ86X60 149 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 LRRC52Q8N7C0 313 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 MARVELD3Q96A59 401 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 APOL2Q9BQE5 337 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 ACAT2Q9BWD1 397 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 REXO4Q9GZR2 422 aaKnown RBP15.51■□□□□ 0.07
SYNE3-203ENST00000554873 TOR3AQ9H497 397 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 LRRC4Q9HBW1 653 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 TLK1Q9UKI8 766 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 RWDD3Q9Y3V2 267 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 A8MV72 311 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-203ENST00000554873 EEF2KO00418 725 aaKnown RBP15.5■□□□□ 0.07
SYNE3-203ENST00000554873 ZBTB24O43167 697 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-203ENST00000554873 MTHFD1P11586 935 aaKnown RBP15.5■□□□□ 0.07
SYNE3-203ENST00000554873 ARSAP15289 507 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 AGXTP21549 392 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 SAT1P21673 171 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 CD47Q08722 323 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 ADIGQ0VDE8 80 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 KCTD2Q14681 263 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 GRM3Q14832 879 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 SYPL2Q5VXT5 272 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 SYTL1Q8IYJ3 562 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 BIRC7Q96CA5 298 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 ZHX1-C8orf76Q96EF9 292 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 C1QTNF1Q9BXJ1 281 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 FAM118AQ9NWS6 357 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 MAP10Q9P2G4 905 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 DERAQ9Y315 318 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 M0QYT0 321 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 MEN1O00255 615 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 PRKD3O94806 890 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 SEMA3DO95025 777 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 SLC25A27O95847 323 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 HPRP00739 348 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 MT-ND1P03886 318 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 ZNF286BP0CG31 522 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 HOXA11P31270 313 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-203ENST00000554873 ATP4BP51164 291 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 PSMD5Q16401 504 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 KCTD11Q693B1 232 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 NLGN4XQ8N0W4 816 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 ZNF555Q8NEP9 628 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 NT5C3BQ969T7 300 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 NPY6RQ99463 290 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 MLPHQ9BV36 600 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-203ENST00000554873 EPS8L2Q9H6S3 715 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 TNS1Q9HBL0 1735 aaKnown RBP15.5■□□□□ 0.07
SYNE3-203ENST00000554873 RBPJLQ9UBG7 517 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 INTS6Q9UL03 887 aaKnown RBP15.5■□□□□ 0.07
SYNE3-203ENST00000554873 NDUFAF1Q9Y375 327 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 FIS1Q9Y3D6 152 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 NUP205Q92621 2012 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 PLXNA1Q9UIW2 1896 aa15.5■□□□□ 0.07
SYNE3-203ENST00000554873 PDPK1O15530 556 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 TRAPPC2P0DI81 140 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 TRAPPC2BP0DI82 140 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 ERCC2P18074 760 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 CYP2B6P20813 491 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 DNAJB1P25685 340 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 GLRBP48167 497 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 NDUFV1P49821 464 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 ATN1P54259 1190 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 POU6F2P78424 691 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 EPS8Q12929 822 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 TRAF3Q13114 568 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 TBRG1Q3YBR2 411 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 NXNL2Q5VZ03 156 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 LAIR2Q6ISS4 152 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 BNIPLQ7Z465 357 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 FUNDC1Q8IVP5 155 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 PARP16Q8N5Y8 322 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 TP53I13Q8NBR0 393 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 LILRB1Q8NHL6 650 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 GAD1Q99259 594 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 PIGVQ9NUD9 493 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 SETD4Q9NVD3 440 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 POLR2AP24928 1970 aaKnown RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 KRT87PA6NCN2 255 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 METTL15A6NJ78 407 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 TARM1B6A8C7 271 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 CTDSP2O14595 271 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 GGT5P36269 586 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 CSRP3P50461 194 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 PRKCDQ05655 676 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 ANO4Q32M45 955 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 CNSTQ6PJW8 725 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 PIWIL4Q7Z3Z4 852 aaKnown RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 GTF2H4Q92759 462 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 SNAPC3Q92966 411 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 FEM1AQ9BSK4 669 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 SMOC2Q9H3U7 446 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 GINS2Q9Y248 185 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 CAPN5O15484 640 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms