RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 BCL10O95999 233 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF135P52742 658 aaPredicted RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 NUP107P57740 925 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 HSPA14Q0VDF9 509 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 RAB39AQ14964 217 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 MEP1AQ16819 746 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 FAM98BQ52LJ0 330 aaKnown RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 TMTC4Q5T4D3 741 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 TBPL2Q6SJ96 375 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ZC3H7AQ8IWR0 971 aaKnown RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF555Q8NEP9 628 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 TNIP2Q8NFZ5 429 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 TMBIM1Q969X1 311 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 UBXN10Q96LJ8 280 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 GPR62Q9BZJ7 368 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 CIPCQ9C0C6 399 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 EPS8L2Q9H6S3 715 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ASB8Q9H765 288 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 RASSF1Q9NS23 344 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 FARSBQ9NSD9 589 aaKnown RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ADGRE2Q9UHX3 823 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 GABRQQ9UN88 632 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 INVSQ9Y283 1065 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ORC6Q9Y5N6 252 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 A0A0U1RQF3 1178 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 SLC22A2O15244 555 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 DEAF1O75398 565 aaPredicted RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 CPSF4O95639 269 aaKnown RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 NTRK1P04629 796 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 MYCLP1P12525 358 aaPredicted RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 HLA-DPA1P20036 260 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 SLC11A2P49281 568 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 NEK2P51955 445 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 BOP1Q14137 746 aaKnown RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 FAM171BQ6P995 826 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 HS6ST3Q8IZP7 471 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 KRTCAP2Q8N6L1 136 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 DRAXINQ8NBI3 349 aaPredicted RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 DDHD1Q8NEL9 900 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 TRPV3Q8NET8 790 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ARRDC2Q8TBH0 407 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 SEPT8Q92599 483 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 MAELQ96JY0 434 aaKnown RBP11.73□□□□□ -0.53
XRCC3-208ENST00000554811 PPP1R2P1Q96PQ5 205 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF385DQ9H6B1 395 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 LMCD1Q9NZU5 365 aa11.73□□□□□ -0.53
XRCC3-208ENST00000554811 AXIN1O15169 862 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 C8BP07358 591 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ABCB1P08183 1280 aaPredicted RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ATXN8OSP0DMR3 200 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 BMP1P13497 986 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 LPOP22079 712 aaPredicted RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 PSMB9P28065 219 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 CDH18Q13634 790 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 MYBPC3Q14896 1274 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 MAPKAPK3Q16644 382 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 CYHR1Q6ZMK1 362 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 GLMNQ92990 594 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ROPN1LQ96C74 230 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 TNKS2Q9H2K2 1166 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 CCM2LQ9NUG4 571 aaPredicted RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 DUS2Q9NX74 493 aaKnown RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 TCRBV3S1A0A5B6 114 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 FTH1P02794 183 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 MMP2P08253 660 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ATXN1LP0C7T5 689 aaKnown RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 OCA2Q04671 838 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 SERINC3Q13530 473 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 NR1D2Q14995 579 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 XKR4Q5GH76 650 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ADGRG5Q8IZF4 528 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 OR2T12Q8NG77 320 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ELMO1Q92556 727 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ROGDIQ9GZN7 287 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 CSNK1G1Q9HCP0 422 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 AMBNQ9NP70 447 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 UTS2RQ9UKP6 389 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 K7ERQ8 282 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF189O75820 626 aaPredicted RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 OCM2P0CE71 109 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 OCMP0CE72 109 aaPredicted RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 MTHFD2P13995 350 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 CD247P20963 164 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 POLR2IP36954 125 aaKnown RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 CAPGP40121 348 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 CDK9P50750 372 aaKnown RBP11.72□□□□□ -0.53
XRCC3-208ENST00000554811 UGT3A2Q3SY77 523 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 C6orf136Q5SQH8 315 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 PRMT9Q6P2P2 845 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 ENPP6Q6UWR7 440 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 DEFB128Q7Z7B8 93 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 KIAA2013Q8IYS2 634 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 FAM86B1Q8N7N1 296 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 OR4F6Q8NGB9 312 aa11.72□□□□□ -0.53
XRCC3-208ENST00000554811 OR2T11Q8NH01 316 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms