RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 NFYCQ13952 458 aa16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 RPS6KA2Q15349 733 aa16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 HIST2H2ACQ16777 129 aaPredicted RBP16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 UNC50Q53HI1 259 aa16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 RALGPS2Q86X27 583 aaPredicted RBP16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 OR13C4Q8NGS5 318 aa16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 TUBB1Q9H4B7 451 aa16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 SPC25Q9HBM1 224 aa16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 MRM3Q9HC36 420 aaKnown RBP16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 OAS3Q9Y6K5 1087 aaKnown RBP16.77■□□□□ 0.28
PPP4R3A-202ENST00000554390 UPK1AO00322 258 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 SNPHO15079 494 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 FPGSQ05932 587 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 GALNT1Q10472 559 aaPredicted RBP16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 GALNT3Q14435 633 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 CTU2Q2VPK5 515 aaKnown RBP16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 CATSPEREQ5SY80 951 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 AGAP9Q5VTM2 703 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 ISCA2Q86U28 154 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 CNTN4Q8IWV2 1026 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 CALML6Q8TD86 181 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 KCTD13Q8WZ19 329 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 UBXN10Q96LJ8 280 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 MOV10Q9HCE1 1003 aaKnown RBP16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 TREX1Q9NSU2 369 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 NEU3Q9UQ49 428 aa16.77■□□□□ 0.27
PPP4R3A-202ENST00000554390 UBA6A0AVT1 1052 aaPredicted RBP16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 ZBBXA8MT70 800 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 ITIH1P19827 911 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 VBP1P61758 197 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 OR4D1Q15615 310 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 DCP1BQ8IZD4 617 aaKnown RBP16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 BPIFB1Q8TDL5 484 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 SDCCAG3Q96C92 435 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 CDK15Q96Q40 435 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 MUC13Q9H3R2 512 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 NMUR1Q9HB89 426 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 CPNE5Q9HCH3 593 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 CNGB3Q9NQW8 809 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 SLCO3A1Q9UIG8 710 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 IKZF3Q9UKT9 509 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 ZNF99A8MXY4 864 aaPredicted RBP16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 GABRDO14764 452 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 ASNA1O43681 348 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 CDK14O94921 469 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 GABARAPO95166 117 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 PCMT1P22061 227 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 CD40LGP29965 261 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 PNPLA4P41247 253 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 GPR15P49685 360 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 IST1P53990 364 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 SCAPQ12770 1279 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 CDC20Q12834 499 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 SEMA3AQ14563 771 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 UTS2BQ765I0 119 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 LGI2Q8N0V4 545 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 NODALQ96S42 347 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 TRIM54Q9BYV2 358 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 TRIT1Q9H3H1 467 aaKnown RBP16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 ABCB10Q9NRK6 738 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 RGS18Q9NS28 235 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 FAM118AQ9NWS6 357 aa16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 NUP214P35658 2090 aaPredicted RBP16.76■□□□□ 0.27
PPP4R3A-202ENST00000554390 COL1A2P08123 1366 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 PDHXO00330 501 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 RGS13O14921 159 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 SLC22A1O15245 554 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 GPR39O43194 453 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 HRH2P25021 359 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 GGT5P36269 586 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 SERPINB10P48595 397 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 AGTR2P50052 363 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 DUSP28Q4G0W2 176 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 AASDHQ4L235 1098 aaPredicted RBP16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 ZNF678Q5SXM1 525 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 RANBP10Q6VN20 620 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 TOP6BLQ8N6T0 577 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 NOTOA8MTQ0 251 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 IMPDH1P20839 514 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 GABARAPL2P60520 117 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 POU4F1Q01851 419 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 FOXM1Q08050 763 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 CD47Q08722 323 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 ALFQ53S48 1182 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 PAGE3Q5JUK9 113 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 TTC23Q5W5X9 447 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 TAS2R42Q7RTR8 314 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 SAPCD2Q86UD0 394 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 CLYBLQ8N0X4 340 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 GPC2Q8N158 579 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 TWIST2Q8WVJ9 160 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 PSMG2Q969U7 264 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 EXOC2Q96KP1 924 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 DACH2Q96NX9 599 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 FCRL5Q96RD9 977 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 RTP3Q9BQQ7 232 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 SMURF2Q9HAU4 748 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 NEK6Q9HC98 313 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 EXD2Q9NVH0 621 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 PAK1IP1Q9NWT1 392 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms