RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SPPL2BQ8TCT7 592 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 SMG7Q92540 1137 aaKnown RBP9.46□□□□□ -0.89
SIX4-202ENST00000554079 FAM149B1Q96BN6 582 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 PDLIM5Q96HC4 596 aaKnown RBP9.46□□□□□ -0.89
SIX4-202ENST00000554079 AHCYL2Q96HN2 611 aaKnown RBP9.46□□□□□ -0.89
SIX4-202ENST00000554079 CPB2Q96IY4 423 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 RPL10LQ96L21 214 aaKnown RBP9.46□□□□□ -0.89
SIX4-202ENST00000554079 GPR137Q96N19 417 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 DCLRE1CQ96SD1 692 aaKnown RBP9.46□□□□□ -0.89
SIX4-202ENST00000554079 ACOX2Q99424 681 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 MMP28Q9H239 520 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 MUC13Q9H3R2 512 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 DUSP21Q9H596 190 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 NMRAL1Q9HBL8 299 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 MAP10Q9P2G4 905 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 CYB5R1Q9UHQ9 305 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 COPS3Q9UNS2 423 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 HSPB11Q9Y547 144 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 HRH3Q9Y5N1 445 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 MAGED1Q9Y5V3 778 aaPredicted RBP9.46□□□□□ -0.89
SIX4-202ENST00000554079 PEX16Q9Y5Y5 336 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 LYVE1Q9Y5Y7 322 aa9.46□□□□□ -0.89
SIX4-202ENST00000554079 BRCA1P38398 1863 aaKnown RBP9.46□□□□□ -0.9
SIX4-202ENST00000554079 WDR27A2RRH5 827 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 OR2A25A4D2G3 310 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 FAM86B1E9PN63 330 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 F8W810 466 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 KCNN4O15554 427 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 NDUFB10O96000 172 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 AHSGP02765 367 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 MT-ND2P03891 347 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 JUNDP17535 347 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 PRDX5P30044 214 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 MAP2K6P52564 334 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 SLC35A2P78381 396 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 POU5F1BQ06416 359 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 LTB4RQ15722 352 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 SNRNP35Q16560 246 aaKnown RBP9.46□□□□□ -0.9
SIX4-202ENST00000554079 HKDC1Q2TB90 917 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 FBXO43Q4G163 708 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 METTL11BQ5VVY1 283 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 USP50Q70EL3 339 aaPredicted RBP9.46□□□□□ -0.9
SIX4-202ENST00000554079 SV2AQ7L0J3 742 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 FAM160B2Q86V87 743 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 PTRH1Q86Y79 214 aaKnown RBP9.46□□□□□ -0.9
SIX4-202ENST00000554079 TMC8Q8IU68 726 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 FUNDC1Q8IVP5 155 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 C9orf62Q8N4C0 152 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 TMEM151AQ8N4L1 468 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 MINDY1Q8N5J2 469 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 PQLC3Q8N755 202 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 AMER2Q8N7J2 671 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 ZNF555Q8NEP9 628 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 OR8H1Q8NGG4 311 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 RDH11Q8TC12 318 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 TMBIM1Q969X1 311 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 PTERQ96BW5 349 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 TBATAQ96M53 351 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 C12orf57Q99622 126 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 TNKS2Q9H2K2 1166 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 FAM83DQ9H4H8 585 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 ACOT13Q9NPJ3 140 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 C1orf112Q9NSG2 853 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 EXD2Q9NVH0 621 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 ERVK13-1Q9NX77 482 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 GPRC5BQ9NZH0 403 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 MID2Q9UJV3 735 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 PCOLCE2Q9UKZ9 415 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 FZD1Q9UP38 647 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 MAPRE3Q9UPY8 281 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 KLHL20Q9Y2M5 609 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 ACOT9Q9Y305 439 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 GMPPBQ9Y5P6 360 aa9.46□□□□□ -0.9
SIX4-202ENST00000554079 OTOFQ9HC10 1997 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 GREB1LQ9C091 1923 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 COL5A2P05997 1499 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 ADGRA2Q96PE1 1338 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 PRR23AA6NEV1 266 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 PRMT5O14744 637 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 TFECO14948 347 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 TRIM3O75382 744 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 STAU1O95793 577 aaKnown RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 MPOP05164 745 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 MAPTP10636 758 aaKnown RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 RAB3AP20336 220 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 F8A1P23610 371 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 GNA15P30679 374 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 HNF1BP35680 557 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 HSD17B2P37059 387 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 ATP5OP48047 213 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 CDK8P49336 464 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 HOXA1P49639 335 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 NAGLUP54802 743 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 RUNX1T1Q06455 604 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 HYAL2Q12891 473 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 KCNAB2Q13303 367 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 CDK5R2Q13319 367 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 TFDP2Q14188 446 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 PRPSAP1Q14558 356 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 ALFQ53S48 1182 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms