RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 SLC26A3P40879 764 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 MAGEA12P43365 314 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 MAPK9P45984 424 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 RGS4P49798 205 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 B4GALNT1Q00973 533 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 BMPR2Q13873 1038 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 ZNF789Q5FWF6 425 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 CTSL3PQ5NE16 218 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 RAPH1Q70E73 1250 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 ADGRG6Q86SQ4 1221 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 TRABD2AQ86V40 505 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 RGL4Q8IZJ4 473 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 ABCA7Q8IZY2 2146 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 PELI3Q8N2H9 469 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 ZBTB44Q8NCP5 570 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 OR56A4Q8NGH8 313 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 KLHDC7BQ96G42 594 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 ATP6V1G3Q96LB4 118 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 LINC00615Q96LM1 132 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-210ENST00000553950 NDNQ99608 321 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 BOCQ9BWV1 1114 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 COL25A1Q9BXS0 654 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-210ENST00000553950 IQCGQ9H095 443 aaKnown RBP14.31□□□□□ -0.12
SHMT2-210ENST00000553950 OR2AG1Q9H205 316 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 SSU72Q9NP77 194 aaKnown RBP14.31□□□□□ -0.12
SHMT2-210ENST00000553950 SNX15Q9NRS6 342 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 GPR27Q9NS67 375 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 SPATS2LQ9NUQ6 558 aaKnown RBP14.31□□□□□ -0.12
SHMT2-210ENST00000553950 MKS1Q9NXB0 559 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 EIF2B4Q9UI10 523 aaKnown RBP14.31□□□□□ -0.12
SHMT2-210ENST00000553950 SLC17A4Q9Y2C5 497 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 ANKRD6Q9Y2G4 727 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 CCDC189A1A4V9 331 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 POM121BA6NF01 834 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 TPP1O14773 563 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 CHUKO15111 745 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 KMOO15229 486 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 NUAK1O60285 661 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 MTX2O75431 263 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 APOA4P06727 396 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 THEGLP0DJG4 465 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 CBSLP0DN79 551 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 COL6A2P12110 1019 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 ENO3P13929 434 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 CHRM3P20309 590 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 CD38P28907 300 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 CBSP35520 551 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 BLKP51451 505 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 AFF3P51826 1226 aaKnown RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 LRP8Q14114 963 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 PDE1CQ14123 709 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 TSNAXIP1Q2TAA8 658 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 SYTL3Q4VX76 610 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 RBM20Q5T481 1227 aaKnown RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 OTOAQ7RTW8 1153 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 TBC1D1Q86TI0 1168 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 TRIM74Q86UV6 250 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 PARGQ86W56 976 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 GALNT13Q8IUC8 556 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 SLC41A1Q8IVJ1 513 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 SRRM1Q8IYB3 904 aaKnown RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 TMEFF1Q8IYR6 380 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 FRMD1Q8N878 549 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 RASGEF1AQ8N9B8 481 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 HM13Q8TCT9 377 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 MZB1Q8WU39 189 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 ZC3H10Q96K80 434 aaKnown RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 BMFQ96LC9 184 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 SLC6A18Q96N87 628 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 ORAI3Q9BRQ5 295 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 TIMM29Q9BSF4 260 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 GPAMQ9HCL2 828 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 ATXN10Q9UBB4 475 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 KLQ9UEF7 1012 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 SMG5Q9UPR3 1016 aaKnown RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 INVSQ9Y283 1065 aa14.3□□□□□ -0.12
SHMT2-210ENST00000553950 MTO1Q9Y2Z2 717 aaKnown RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 OAS3Q9Y6K5 1087 aaKnown RBP14.3□□□□□ -0.12
SHMT2-210ENST00000553950 C17orf113A0A1B0GUU1 675 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 PRSS38A1L453 326 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 FAM86C2PA6NEL3 165 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 LIN7AO14910 233 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-210ENST00000553950 GRID2O43424 1007 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 GLRA3O75311 464 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 NIPSNAP2O75323 286 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 ALDOAP04075 364 aaKnown RBP14.29□□□□□ -0.12
SHMT2-210ENST00000553950 GSTA1P08263 222 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 ZNF37AP17032 561 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-210ENST00000553950 CCNFP41002 786 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 ABCG1P45844 678 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 DHPSP49366 369 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-210ENST00000553950 CLDN2P57739 230 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 TAS2R39P59534 338 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 PLK5Q496M5 336 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 KHDC1Q4VXA5 237 aaKnown RBP14.29□□□□□ -0.12
SHMT2-210ENST00000553950 TNFAIP8L3Q5GJ75 292 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 PLEKHS1Q5SXH7 462 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 KLC3Q6P597 504 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 ZNF549Q6P9A3 640 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms