RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TUBBP07437 444 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 HMOX1P09601 288 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 CCDC175P0C221 793 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 LINC00271P0C7V0 271 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 GAGE12FP0CL80 117 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 GAGE12GP0CL81 117 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 GAGE12IP0CL82 117 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 P4HA1P13674 534 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 IFNAR1P17181 557 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 HLA-DPA1P20036 260 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 AVPR2P30518 371 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 ARL1P40616 181 aaPredicted RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 GPR12P47775 334 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 CLCN3P51790 818 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 LMO4P61968 165 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 HMGN5P82970 282 aaKnown RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 ARHGAP8P85298 464 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 ZNF155Q12901 538 aaPredicted RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 GAGE1Q13065 139 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 GAGE4Q13068 117 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 THOC5Q13769 683 aaKnown RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 RCN2Q14257 317 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 PPA1Q15181 289 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 CALCRLQ16602 461 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 AP5B1Q2VPB7 878 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 DPCR1Q3MIW9 517 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 ZNF667Q5HYK9 610 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 SH2D4BQ5SQS7 431 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 PLBD1Q6P4A8 553 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 TMEM81Q6P7N7 255 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 IYDQ6PHW0 289 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 INO80CQ6PI98 192 aaPredicted RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 TSSK4Q6SA08 328 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 MCM10Q7L590 875 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 SLC26A9Q7LBE3 791 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 CHST3Q7LGC8 479 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 CCDC186Q7Z3E2 898 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 SLC46A3Q7Z3Q1 461 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 PIWIL3Q7Z3Z3 882 aaKnown RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 NLRP14Q86W24 1093 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 SYT2Q8N9I0 419 aaPredicted RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 TDRD5Q8NAT2 981 aaKnown RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 GRK7Q8WTQ7 553 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 DEPDC1BQ8WUY9 529 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 CNOT9Q92600 299 aaKnown RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 ATOH1Q92858 354 aaPredicted RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 ATP6V0A1Q93050 837 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 EXOC4Q96A65 974 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 CABS1Q96KC9 395 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 C1orf74Q96LT6 269 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 NR1H4Q96RI1 486 aaPredicted RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 GAD1Q99259 594 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 SRSF8Q9BRL6 282 aaKnown RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 CCDC106Q9BWC9 280 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 NUF2Q9BZD4 464 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 BARHL1Q9BZE3 327 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 LRRC4Q9HBW1 653 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 GIMAP4Q9NUV9 329 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 TMEM51Q9NW97 253 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 MPP6Q9NZW5 540 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 HCN3Q9P1Z3 774 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 TBK1Q9UHD2 729 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 SLCO3A1Q9UIG8 710 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 MTF2Q9Y483 593 aaPredicted RBP2.29□□□□□ -2.04
SRP54-204ENST00000553923 SESN1Q9Y6P5 492 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 CAPN7Q9Y6W3 813 aa2.29□□□□□ -2.04
SRP54-204ENST00000553923 ABCC9O60706 1549 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GOLGA6L10A0A0M3HER8 536 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TRBC2A0A5B9 178 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 OR6C68A6NDL8 312 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GAGE10A6NGK3 116 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GLOD5A6NK44 160 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 A6NL46 340 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 LRRC53A6NM62 1247 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 C17orf100A8MU93 164 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TEX22C9J3V5 150 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 WDR46O15213 610 aaKnown RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 CEP104O60308 925 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 HBP1O60381 514 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 SYNCRIPO60506 623 aaKnown RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 FMO6PO60774 539 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TADA2AO75478 443 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 REC8O95072 547 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GUCA1CO95843 209 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 IL1AP01583 271 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TPOP07202 933 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GALTP07902 379 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TPM2P07951 284 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 PCP11498 1178 aaKnown RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 SELLP14151 372 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 ARSAP15289 507 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GAP43P17677 238 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 POU1F1P28069 291 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 ALDH4A1P30038 563 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 MC5RP33032 325 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 HNF1BP35680 557 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 NPY4RP50391 375 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TPD52P55327 224 aaPredicted RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 KRTAP12-2P59991 146 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 SCN1BQ07699 218 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms