RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FBXO39Q8N4B4 442 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 XXYLT1Q8NBI6 393 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 SMRP1Q8NCR6 262 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 OR6J1Q8NGC5 347 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 TBC1D16Q8TBP0 767 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 WDR20Q8TBZ3 569 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 SLC38A5Q8WUX1 472 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 TANKQ92844 425 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 VPS33AQ96AX1 596 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 PHF21BQ96EK2 531 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 ZNF830Q96NB3 372 aaPredicted RBP5.05□□□□□ -1.6
SYNE2-210ENST00000553455 QRFPRQ96P65 431 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 GOLPH3LQ9H4A5 285 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 ERVMER34-1Q9H9K5 563 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 CHMP1AQ9HD42 196 aaPredicted RBP5.05□□□□□ -1.6
SYNE2-210ENST00000553455 OLAHQ9NV23 265 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 OCIAD1Q9NX40 245 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 RCC2Q9P258 522 aaKnown RBP5.05□□□□□ -1.6
SYNE2-210ENST00000553455 PDS5AQ29RF7 1337 aaKnown RBP5.04□□□□□ -1.6
SYNE2-210ENST00000553455 PLK4O00444 970 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 CDK4P11802 303 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 SCP2P22307 547 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 EEF1DP29692 281 aaKnown RBP5.04□□□□□ -1.6
SYNE2-210ENST00000553455 POU5F1Q01860 360 aaKnown RBP5.04□□□□□ -1.6
SYNE2-210ENST00000553455 TRAF2Q12933 501 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 MELKQ14680 651 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 PSMD6Q15008 389 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 SNAPC1Q16533 368 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 HLFQ16534 295 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 CALCRLQ16602 461 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 LETM2Q2VYF4 491 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 KRBOX4Q5JUW0 171 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 ZDHHC20Q5W0Z9 365 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 ZNF595Q8IYB9 648 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 AFAP1Q8N556 730 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 SLC5A8Q8N695 610 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 RBMXL3Q8N7X1 1067 aaKnown RBP5.04□□□□□ -1.6
SYNE2-210ENST00000553455 ABTB1Q969K4 478 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-210ENST00000553455 RMDN1Q96DB5 314 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 MTBPQ96DY7 904 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 OR1F2PQ96R84 312 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 SH3GLB2Q9NR46 395 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 HAO2Q9NYQ3 351 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 ZNF224Q9NZL3 707 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 KLHL9Q9P2J3 617 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 SIX4Q9UIU6 781 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 OSGIN1Q9UJX0 560 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 AMDHD2Q9Y303 409 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 NFS1Q9Y697 457 aa5.04□□□□□ -1.6
SYNE2-210ENST00000553455 IGLV5-37A0A075B6J1 123 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 H0YIN7 160 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 TADA2AO75478 443 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 SLCO2B1O94956 709 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 HSPA4LO95757 839 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 PRSS2P07478 247 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 MYOD1P15172 320 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 DNASE1P24855 282 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 CDC25AP30304 524 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 ZNF41P51814 821 aaPredicted RBP5.03□□□□□ -1.6
SYNE2-210ENST00000553455 CTSCP53634 463 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 COG7P83436 770 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 PDE1BQ01064 536 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 ALS2CLQ60I27 953 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 KRT80Q6KB66 452 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 FAM122CQ6P4D5 195 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 SLFN11Q7Z7L1 901 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 ODF3L1Q8IXM7 274 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 FBXL14Q8N1E6 418 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 SLC20A1Q8WUM9 679 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 TEKT4Q8WW24 435 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 DNAAF4Q8WXU2 420 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 PIGTQ969N2 578 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 ERLEC1Q96DZ1 483 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 NEK1Q96PY6 1258 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 OLFM1Q99784 485 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 SYT17Q9BSW7 474 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 TMEM30AQ9NV96 361 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 SMARCAL1Q9NZC9 954 aa5.03□□□□□ -1.6
SYNE2-210ENST00000553455 FEZF1A0PJY2 475 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 OR2M5A3KFT3 312 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 LILRA5A6NI73 299 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF587BE7ETH6 402 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 TMEM178BH3BS89 294 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 INO80B-WBP1J3KQ70 363 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 TO15178 435 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 ZBTB43O43298 467 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 PRAMEF11O60813 436 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 PMS2P2O95744 297 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 TRUB2O95900 331 aaKnown RBP5.02□□□□□ -1.61
SYNE2-210ENST00000553455 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 ACAA1P09110 424 aaPredicted RBP5.02□□□□□ -1.61
SYNE2-210ENST00000553455 GJA1P17302 382 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 TMPOP42166 694 aaKnown RBP5.02□□□□□ -1.61
SYNE2-210ENST00000553455 PDLIM4P50479 330 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 CSE1LP55060 971 aaKnown RBP5.02□□□□□ -1.61
SYNE2-210ENST00000553455 CD81P60033 236 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 SNRPEP62304 92 aaKnown RBP5.02□□□□□ -1.61
SYNE2-210ENST00000553455 ROR1Q01973 937 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 EGR4Q05215 589 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 SLC20A2Q08357 652 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms