RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 FGF3P11487 239 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-207ENST00000553290 CCL4P13236 92 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 UGT1A6P19224 532 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 UGT1A1P22309 533 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 UGT1A4P22310 534 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 UGT1A3P35503 534 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 GSDMDP57764 484 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 KLF1Q13351 362 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-207ENST00000553290 AGAP9Q5VTM2 703 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 INO80CQ6PI98 192 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-207ENST00000553290 ABRAXAS1Q6UWZ7 409 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 CCDC81Q6ZN84 652 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 ARHGEF18Q6ZSZ5 1173 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 C11orf96Q7Z7L8 435 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 TRIM48Q8IWZ4 208 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 ZNF398Q8TD17 642 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 AHCTF1Q8WYP5 2266 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 NCSTNQ92542 709 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 HES6Q96HZ4 224 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 C19orf43Q9BQ61 176 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 TBL1YQ9BQ87 522 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 UGT1A7Q9HAW7 530 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 UGT1A10Q9HAW8 530 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 UGT1A8Q9HAW9 530 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 ARNT2Q9HBZ2 717 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 TMEM9Q9P0T7 183 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 SCHIP1Q9P0W5 487 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-207ENST00000553290 ZNF106Q9H2Y7 1883 aaKnown RBP12.74□□□□□ -0.37
ACTN1-207ENST00000553290 ERVH48-1M5A8F1 160 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 GAPDHSO14556 408 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-207ENST00000553290 KRT86O43790 486 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 PRAMEF1O95521 474 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 MSH3P20585 1137 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 MPSTP25325 297 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 SLC19A1P41440 591 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 HALP42357 657 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 MAPK9P45984 424 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 DMPKQ09013 629 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 PARP6Q2NL67 630 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 GPRC6AQ5T6X5 926 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 TMEM220Q6QAJ8 160 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 TMEM26Q6ZUK4 368 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 ARHGAP22Q7Z5H3 698 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 AMZ2Q86W34 360 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 PLXDC1Q8IUK5 500 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 RBM12BQ8IXT5 1001 aaKnown RBP12.74□□□□□ -0.37
ACTN1-207ENST00000553290 KLHDC8BQ8IXV7 354 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 RASGEF1AQ8N9B8 481 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 FAM71DQ8N9W8 422 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 OR4K2Q8NGD2 314 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 ZNF514Q96K75 400 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-207ENST00000553290 APOL2Q9BQE5 337 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 DDA1Q9BW61 102 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 ASPSCR1Q9BZE9 553 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 POT1Q9NUX5 634 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 FOXJ2Q9P0K8 574 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 ZNF624Q9P2J8 865 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-207ENST00000553290 PCDHB11Q9Y5F2 797 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 PCDHGA3Q9Y5H0 932 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 CAPN6Q9Y6Q1 641 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 ATMQ13315 3056 aa12.74□□□□□ -0.37
ACTN1-207ENST00000553290 KLHL33A6NCF5 533 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 B4E171 279 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-207ENST00000553290 GPR39O43194 453 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 POP7O75817 140 aaKnown RBP12.73□□□□□ -0.37
ACTN1-207ENST00000553290 SRP72O76094 671 aaKnown RBP12.73□□□□□ -0.37
ACTN1-207ENST00000553290 BRAFP15056 766 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 RPL10P27635 214 aaKnown RBP12.73□□□□□ -0.37
ACTN1-207ENST00000553290 AKT1P31749 480 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 HADHAP40939 763 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 TSPAN7P41732 249 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 CTSCP53634 463 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 RAB15P59190 212 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 MSLNQ13421 630 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-207ENST00000553290 OLIG2Q13516 323 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 PTPRCAPQ14761 206 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 TGIF1Q15583 401 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 SEPT7Q16181 437 aaKnown RBP12.73□□□□□ -0.37
ACTN1-207ENST00000553290 LONRF2Q1L5Z9 754 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 P3H1Q32P28 736 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 SNAP47Q5SQN1 464 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 SEL1L2Q5TEA6 688 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 DENND5AQ6IQ26 1287 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 ZFAND4Q86XD8 727 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 FAM129CQ86XR2 697 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 DTX1Q86Y01 620 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 SLC35B2Q8TB61 432 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 ART4Q93070 314 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 CXorf40BQ96DE9 158 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 WBP1Q96G27 269 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 TBC1D10AQ9BXI6 508 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 ASB8Q9H765 288 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 SLC39A1Q9NY26 324 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 FKBPLQ9UIM3 349 aa12.73□□□□□ -0.37
ACTN1-207ENST00000553290 ATRXP46100 2492 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 MN1Q10571 1320 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-207ENST00000553290 OR2AG2A6NM03 316 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms