RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 LRCH3Q96II8 777 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 ERVK-6Q9BXR3 956 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 MYLK2Q9H1R3 596 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 FADS3Q9Y5Q0 445 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 PIAS3Q9Y6X2 628 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 MID1O15344 667 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 SGTAO43765 313 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 MMP20O60882 483 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 SOD1P00441 154 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 EGFP01133 1207 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 SERPINB3P29508 390 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 PRKAA1Q13131 559 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 SETDB1Q15047 1291 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 PFKFB4Q16877 469 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 ACSBG2Q5FVE4 666 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 TMEM196Q5HYL7 178 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 KIAA1211LQ6NV74 962 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 RPS27LQ71UM5 84 aaKnown RBP19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 PELI3Q8N2H9 469 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 PTGR2Q8N8N7 351 aaPredicted RBP19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 PANX3Q96QZ0 392 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 GABRG3Q99928 467 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 WWP1Q9H0M0 922 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 GSTO2Q9H4Y5 243 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 KLHL42Q9P2K6 505 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 ZDHHC2Q9UIJ5 367 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 SYCE1LA8MT33 242 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 NEMP1O14524 444 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 KLK8O60259 260 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 OR56A5P0C7T3 313 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 AKT1P31749 480 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 CCR7P32248 378 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 PON2Q15165 354 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 IER5LQ5T953 404 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 FRMD7Q6ZUT3 714 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 DET1Q7L5Y6 550 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 IL17RCQ8NAC3 791 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 AGR3Q8TD06 166 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 GLYATL1Q969I3 302 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 COL4A2P08572 1712 aa19.29■□□□□ 0.68
RBFOX1-215ENST00000553186 CKAP5Q14008 2032 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 SYNCRIPO60506 623 aaKnown RBP19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 SNUPNO95149 360 aaKnown RBP19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 DGKAP23743 735 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 NTSR1P30989 418 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 RPL14P50914 215 aaKnown RBP19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 HK3P52790 923 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 COPAP53621 1224 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 TAS2R38P59533 333 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 CCDC85BQ15834 202 aaPredicted RBP19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 UNC50Q53HI1 259 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 AGBL4Q5VU57 503 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 ZNF765Q7L2R6 523 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 CACUL1Q86Y37 369 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 DCUN1D1Q96GG9 259 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 SHCBP1LQ9BZQ2 653 aa19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 STN1Q9H668 368 aaKnown RBP19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 CNOT6Q9ULM6 557 aaKnown RBP19.28■□□□□ 0.68
RBFOX1-215ENST00000553186 SUPT3HB4E1H0 165 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 MATN2O00339 956 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 MAGEC1O60732 1142 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 ADAM23O75077 832 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 SUPT3HO75486 399 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 SIX3O95343 332 aaPredicted RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 RGS4P49798 205 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 GALNT1Q10472 559 aaPredicted RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 BNIP1Q12981 228 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 TUBB3Q13509 450 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 CRY1Q16526 586 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 SBSNQ6UWP8 590 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 CYHR1Q6ZMK1 362 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 CLNKQ7Z7G1 428 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 ALYREFQ86V81 257 aaKnown RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 KCNV2Q8TDN2 545 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 DNASE1L2Q92874 299 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 NUS1Q96E22 293 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 C8orf33Q9H7E9 229 aaPredicted RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 DNAJC28Q9NX36 388 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 SERGEFQ9UGK8 458 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 SLC12A4Q9UP95 1085 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 CFAP99D6REC4 459 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 K7ESM1 405 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 RNASEH1O60930 286 aaKnown RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 GFAPP14136 432 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 C5AR1P21730 350 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 AOAHP28039 575 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 IDH3AP50213 366 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 DPTQ07507 201 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 LDLRAP1Q5SW96 308 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 ZNF648Q5T619 568 aaPredicted RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 VWA5B1Q5TIE3 1220 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 GPSM1Q86YR5 675 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 PLCD3Q8N3E9 789 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 PHF7Q9BWX1 381 aaPredicted RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 MKRN2Q9H000 416 aaKnown RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 COG4Q9H9E3 785 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 KCTD5Q9NXV2 234 aa19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 RRP15Q9Y3B9 282 aaKnown RBP19.27■□□□□ 0.68
RBFOX1-215ENST00000553186 LRRC14BA6NHZ5 514 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms