RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 HM13Q8TCT9 377 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 STAMBPL1Q96FJ0 436 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 DEPDC7Q96QD5 511 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 AGAP2Q99490 1192 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 FAM167BQ9BTA0 163 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 STRADBQ9C0K7 418 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 SARS2Q9NP81 518 aaKnown RBP10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 CHRAC1Q9NRG0 131 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 KLC4Q9NSK0 619 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 POT1Q9NUX5 634 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 INTS10Q9NVR2 710 aaKnown RBP10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 UCKL1Q9NWZ5 548 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 GULP1Q9UBP9 304 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 MAD1L1Q9Y6D9 718 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 RPS6KL1Q9Y6S9 549 aa10.12□□□□□ -0.79
TRAFD1-208ENST00000552890 ARID1BQ8NFD5 2236 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 PDZK1P1A8MUH7 402 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 PRMT5O14744 637 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 BUD23O43709 281 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A9O60656 530 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 SPAG6O75602 509 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 POP7O75817 140 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 DKK1O94907 266 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 ADRB1P08588 477 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 GSTA2P09210 222 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 ACP5P13686 325 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 XRCC1P18887 633 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A6P19224 532 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A1P22309 533 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A4P22310 534 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 MGAT1P26572 445 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A3P35503 534 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A5P35504 534 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 MLLT3P42568 568 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 PTGIRP43119 386 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 MAGEA3P43357 314 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 CD151P48509 253 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 POLD2P49005 469 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 PRLHRP49683 370 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 ACADVLP49748 655 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 TMPRSS15P98073 1019 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 SHC2P98077 582 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 EIF3IQ13347 325 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 C1orf61Q13536 156 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 TPRG1LQ5T0D9 272 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 FNBP1LQ5T0N5 605 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 METRNLQ641Q3 311 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 TTC23LQ6PF05 361 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 IYDQ6PHW0 289 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 ABRAXAS1Q6UWZ7 409 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 RFLNAQ6ZTI6 216 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 SERPINA9Q86WD7 417 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 SFRP1Q8N474 314 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 OR13J1Q8NGT2 312 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 OR10G6Q8NH81 332 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 IFI44Q8TCB0 444 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 ASZ1Q8WWH4 475 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 TMEM74Q96NL1 305 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 SMIM14Q96QK8 99 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 EBNA1BP2Q99848 306 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 OSGEPL1Q9H4B0 414 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A7Q9HAW7 530 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A10Q9HAW8 530 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT1A8Q9HAW9 530 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 EPB41L5Q9HCM4 733 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 MRPL40Q9NQ50 206 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 FAM114A2Q9NRY5 505 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 TREX1Q9NSU2 369 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 SMARCAL1Q9NZC9 954 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 KLHL42Q9P2K6 505 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 MTRF1LQ9UGC7 380 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 GNPTGQ9UJJ9 305 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 ANGPTL2Q9UKU9 493 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 CORO1CQ9ULV4 474 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 BTBD3Q9Y2F9 522 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 NEUROG3Q9Y4Z2 214 aa10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 OAS3Q9Y6K5 1087 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 TDRD6O60522 2096 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-208ENST00000552890 TMEM131Q92545 1883 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 LAMA1P25391 3075 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 TP53BP1Q12888 1972 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 A0A0U1RQS6 177 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 UBA6A0AVT1 1052 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 CCDC162PA2VCL2 907 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 CPED1A4D0V7 1026 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 B4DGG1 531 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 TTI1O43156 1089 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 MAP3K7O43318 606 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 ABCB7O75027 752 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 VAPBO95292 243 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 GOT2P00505 430 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 VIPP01282 170 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 ESR1P03372 595 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 APOA4P06727 396 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 SLC35G4P0C7Q5 338 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 JUPP14923 745 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 RPS3P23396 243 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 FOXN2P32314 431 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 SQSTM1Q13501 440 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 OLIG2Q13516 323 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms