RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TUBB3Q13509 450 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 ELOAQ14241 798 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 TMCO4Q5TGY1 634 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 VWA5B1Q5TIE3 1220 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 KLHDC7AQ5VTJ3 777 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 LRRC66Q68CR7 880 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 MED25Q71SY5 747 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 ZNF677Q86XU0 584 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 TMEM139Q8IV31 216 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 RAVER1Q8IY67 606 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 ZBTB2Q8N680 514 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 ARFGAP1Q8N6T3 406 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 NPWQ8N729 165 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 SLC38A9Q8NBW4 561 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 SLC30A5Q8TAD4 765 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 SLC20A1Q8WUM9 679 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 UBE2Q2Q8WVN8 375 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 RSC1A1Q92681 617 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 ZNF599Q96NL3 588 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 SMIM14Q96QK8 99 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 BAG1Q99933 345 aaPredicted RBP11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 C11orf70Q9BRQ4 267 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 RIOK2Q9BVS4 552 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 CHST8Q9H2A9 424 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 GANQ9H2C0 597 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 SP110Q9HB58 689 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 CAPN11Q9UMQ6 739 aa11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 G3BP2Q9UN86 482 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 COPG1Q9Y678 874 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-202ENST00000552829 IGHV5-51A0A0C4DH38 117 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 SOWAHDA6NJG2 315 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 E2F3O00716 465 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 NUAK1O60285 661 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 FZD6O60353 706 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 CAPN1P07384 714 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 UNGP13051 313 aaPredicted RBP11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 CTPS1P17812 591 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 HSPA9P38646 679 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 VAV2P52735 878 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 ZNF143P52747 638 aaPredicted RBP11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 CDK18Q07002 472 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 KCNAB1Q14722 419 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 LBRQ14739 615 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 LCN10Q6JVE6 187 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 SCYL2Q6P3W7 929 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 SPNS3Q6ZMD2 512 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 FAM92BQ6ZTR7 304 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 USP45Q70EL2 814 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 ZDHHC12Q96GR4 267 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 ZNF514Q96K75 400 aaPredicted RBP11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 LRFN5Q96NI6 719 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 PANX2Q96RD6 677 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 MGME1Q9BQP7 344 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 WASH6PQ9NQA3 447 aa11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 LUC7L2Q9Y383 392 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-202ENST00000552829 DNHD1Q96M86 4753 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 FBN3Q75N90 2809 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 PCM1Q15154 2024 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 A0A1W2PQJ5 194 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 LRRC53A6NM62 1247 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 PRSS44E7EML9 344 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 GRID2O43424 1007 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 CPNE3O75131 537 aaKnown RBP11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 VIPP01282 170 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 JCHAINP01591 159 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 PDHA1P08559 390 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 NUDT7P0C024 238 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 ZNF30P17039 623 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 ERCC2P18074 760 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 PTGER4P35408 488 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 PPP1CAP62136 330 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 ZBED6P86452 979 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 CDR2Q01850 454 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 ART3Q13508 389 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 CA9Q16790 459 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 RALGPS1Q5JS13 557 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 HENMT1Q5T8I9 393 aaKnown RBP11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 ARMC12Q5T9G4 340 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 FAM69BQ5VUD6 431 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 E4F1Q66K89 784 aaPredicted RBP11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 CERS6Q6ZMG9 384 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 Q6ZS92 163 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 KCNMB4Q86W47 210 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 SIDT2Q8NBJ9 832 aaKnown RBP11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 C3orf20Q8ND61 904 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 UBXN4Q92575 508 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 MR1Q95460 341 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 PCDHB18PQ96TA0 734 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 CNPY3Q9BT09 278 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 STK33Q9BYT3 514 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 NLNQ9BYT8 704 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 CARD9Q9H257 536 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 SLC40A1Q9NP59 571 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 FGF21Q9NSA1 209 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 GPATCH2LQ9NWQ4 482 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 SLC23A2Q9UGH3 650 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 TCFL5Q9UL49 500 aa11.15□□□□□ -0.62
SUPT16H-202ENST00000552829 A0A0J9YYE9 177 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 FADS2P1A8MWK0 482 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms