RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CCDC188H7C350 402 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 PSMA3P25788 255 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 MGAT1P26572 445 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 ALDH4A1P30038 563 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 HALP42357 657 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 CRADDP78560 199 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 CCL7P80098 99 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 HHEXQ03014 270 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 IYDQ6PHW0 289 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 OR13J1Q8NGT2 312 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 CPT1BQ92523 772 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 GATA6Q92908 595 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 SH3KBP1Q96B97 665 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 SGF29Q96ES7 293 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 SLC38A3Q99624 504 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 VPS37BQ9H9H4 285 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 XAB2Q9HCS7 855 aaKnown RBP18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 SAMD15Q9P1V8 674 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 SLC2A6Q9UGQ3 507 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 NEU2Q9Y3R4 380 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 CEP295Q9C0D2 2601 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 KLHL33A6NCF5 533 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 OR51F1A6NGY5 319 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 D6RAR5 112 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 EML2O95834 649 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 GOT2P00505 430 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 ATP1B2P14415 290 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 FOXN2P32314 431 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 PPARGP37231 505 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 GPR3P46089 330 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 FASLGP48023 281 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 CDKN1CP49918 316 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 AMZ1Q400G9 498 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 MAP9Q49MG5 647 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 BCL7AQ4VC05 210 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 FASTKD1Q53R41 847 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 LYPLAL1Q5VWZ2 237 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 ANKRD22Q5VYY1 191 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 CASC4Q6P4E1 433 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 SYT10Q6XYQ8 523 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 ZNF534Q76KX8 674 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 ZNF438Q7Z4V0 828 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 C11orf96Q7Z7L8 435 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 NXPE2Q96DL1 559 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 SARS2Q9NP81 518 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 CHRAC1Q9NRG0 131 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 SYBUQ9NX95 663 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 KCNK4Q9NYG8 393 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 FAM8A1Q9UBU6 413 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 PCYOX1Q9UHG3 505 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 ANAPC5Q9UJX4 755 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 ACACBO00763 2458 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 UNC13CQ8NB66 2214 aa18.17■□□□□ 0.5
PRPF40B-216ENST00000552301 A6NCN8 305 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 MGAT4DA6NG13 374 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 C1QTNF9BB2RNN3 333 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 F8W8V4 182 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 GOLGA8MH3BSY2 632 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 TMEM63AO94886 807 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 C1QTNF9P0C862 333 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 PRSS56P0CW18 603 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 RPL10P27635 214 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 PRLHRP49683 370 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 B4GALNT1Q00973 533 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 DR1Q01658 176 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 ACVR1Q04771 509 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 DMPKQ09013 629 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 PTK6Q13882 451 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 ITIH4Q14624 930 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 DBN1Q16643 649 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 ISXQ2M1V0 245 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 AARS2Q5JTZ9 985 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 SYDE1Q6ZW31 735 aaPredicted RBP18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 PPIL6Q8IXY8 311 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 OTUD6BQ8N6M0 293 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 BEND7Q8N7W2 519 aaPredicted RBP18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 MCUQ8NE86 351 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 OR4L1Q8NH43 312 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 SLCO2A1Q92959 643 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 GRAMD1AQ96CP6 724 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 ZNF778Q96MU6 729 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 CNTNAP3BQ96NU0 1288 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 CNTNAP3Q9BZ76 1288 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 MRM3Q9HC36 420 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 CPNE7Q9UBL6 633 aa18.16■□□□□ 0.5
PRPF40B-216ENST00000552301 IGLV3-16A0A075B6K0 115 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 A0A1W2PQM1 296 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 TMEM8BA6NDV4 472 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 TRABD2BA6NFA1 517 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 QSOX1O00391 747 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 NTN3O00634 580 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 FANCGO15287 622 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 PPM1DO15297 605 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 VIPP01282 170 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 MLNP12872 115 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 NSG1P42857 185 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 DRG2P55039 364 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 OR1D5P58170 312 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 NFE2L1Q14494 772 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms