RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 WSCD1Q658N2 575 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 KIAA0895LQ68EN5 471 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 FAAH2Q6GMR7 532 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 NCAPH2Q6IBW4 605 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 WDR93Q6P2C0 686 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 BLOC1S2Q6QNY1 142 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 KIRREL2Q6UWL6 708 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CLEC18BQ6UXF7 455 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 BBS12Q6ZW61 710 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 OTUD6AQ7L8S5 288 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 BHLHA9Q7RTU4 235 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CEP57Q86XR8 500 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 TMTC1Q8IUR5 882 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 DIS3L2Q8IYB7 885 aaKnown RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 OR4N4Q8N0Y3 316 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 PTGR2Q8N8N7 351 aaPredicted RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SYT2Q8N9I0 419 aaPredicted RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CLEC18CQ8NCF0 446 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 STKLD1Q8NE28 680 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CCDC12Q8WUD4 166 aaPredicted RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SNRNP27Q8WVK2 155 aaKnown RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 GLMPQ8WWB7 406 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ADAMTS14Q8WXS8 1223 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 DNASE2BQ8WZ79 361 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SLC9A6Q92581 669 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 GTF3C6Q969F1 213 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 FAM131CQ96AQ9 280 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 DNAJC19Q96DA6 116 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF419Q96HQ0 510 aaPredicted RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SENP8Q96LD8 212 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 COQ10AQ96MF6 247 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 GABRG3Q99928 467 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 MLST8Q9BVC4 326 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 APOL6Q9BWW8 343 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 C2orf40Q9H1Z8 148 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 EBF3Q9H4W6 596 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SAP30LQ9HAJ7 183 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 C17orf75Q9HAS0 396 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 IRAK4Q9NWZ3 460 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 GDAP2Q9NXN4 497 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 VPS4AQ9UN37 437 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ARHGAP26Q9UNA1 814 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 GDAQ9Y2T3 454 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ASB3Q9Y575 518 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 EML5Q05BV3 1969 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ARID1BQ8NFD5 2236 aaPredicted RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 PHLPP2Q6ZVD8 1323 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 LRBAP50851 2863 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 GREB1Q4ZG55 1949 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CCDC187A0A096LP49 1063 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 IGHV1OR15-9A0A0B4J2B8 117 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 SPAARA0A1B0GVQ0 90 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 A0A1W2PNU3 283 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF840PA6NDX5 716 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 FAM90A20PA6NIJ5 464 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 AGAP5A6NIR3 686 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 LRRIQ4A6NIV6 560 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 MBD3L5A6NJ08 208 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 C3orf70A6NLC5 250 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 A6NLC8 198 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 HHLA1C9JL84 531 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 STX16-NPEPL1H3BU86 382 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 K7ERI5 159 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 M0QYT0 321 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 STX16O14662 325 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF263O14978 683 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PAPSS1O43252 624 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 DKC1O60832 514 aaKnown RBP eCLIP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ESRRBO95718 433 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CAVIN2O95810 425 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 KLKB1P03952 638 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CLTAP09496 248 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 GIMD1P0DJR0 217 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TNNT1P13805 278 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 GABRG2P18507 467 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CYP2F1P24903 491 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 LMO2P25791 158 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 GABRR2P28476 465 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 DUSP1P28562 367 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CXCR5P32302 372 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 HOXD12P35452 270 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PGM1P36871 562 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 EIF2DP41214 584 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PRPHP41219 470 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 MAGEA11P43364 429 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 DIO1P49895 249 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TUBP50607 506 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CCT8P50990 548 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 NOVA1P51513 510 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 SEC24CP53992 1094 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 GEMIN4P57678 1058 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 RPL15P61313 204 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TLE3Q04726 772 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 SPAG1Q07617 926 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 SRSF1Q07955 248 aaKnown RBP eCLIP2.45□□□□□ -2.021e-6■■■■□ 21.4
CPSF6-207ENST00000551516 LMAN2Q12907 356 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ORC2Q13416 577 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TFDP1Q14186 410 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CALCRLQ16602 461 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ERCC6LQ2NKX8 1250 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms