RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 OR1N1Q8NGS0 311 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 CPT1BQ92523 772 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 NINJ1Q92982 152 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 CELF6Q96J87 481 aaKnown RBP13.12□□□□□ -0.31
SNRPF-203ENST00000551316 C18orf12Q96KH6 178 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 RIOK2Q9BVS4 552 aaKnown RBP13.12□□□□□ -0.31
SNRPF-203ENST00000551316 RAB33BQ9H082 229 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 DTLQ9NZJ0 730 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 ARMCX3Q9UH62 379 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-203ENST00000551316 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 TMEM59LQ9UK28 342 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 PTRH2Q9Y3E5 179 aaKnown RBP13.12□□□□□ -0.31
SNRPF-203ENST00000551316 OR5K4A6NMS3 321 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 HTRA2O43464 458 aaPredicted RBP13.11□□□□□ -0.31
SNRPF-203ENST00000551316 KLHL18O94889 574 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 INHBBP09529 407 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
SNRPF-203ENST00000551316 SMSP52788 366 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 DRG2P55039 364 aaKnown RBP13.11□□□□□ -0.31
SNRPF-203ENST00000551316 FOLH1Q04609 750 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 LRRC66Q68CR7 880 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 SYNCQ9H7C4 482 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 ACTR5Q9H9F9 607 aaPredicted RBP13.11□□□□□ -0.31
SNRPF-203ENST00000551316 VPS18Q9P253 973 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 SEC14L3Q9UDX4 400 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 FBXL4Q9UKA2 621 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 DNAJC16Q9Y2G8 782 aa13.11□□□□□ -0.31
SNRPF-203ENST00000551316 TLCD2A6NGC4 264 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 PSMD11O00231 422 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 PROM1O43490 865 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 YEATS4O95619 227 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 CBSLP0DN79 551 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 ZNF8P17098 575 aaPredicted RBP13.1□□□□□ -0.31
SNRPF-203ENST00000551316 ADSLP30566 484 aaPredicted RBP13.1□□□□□ -0.31
SNRPF-203ENST00000551316 CBSP35520 551 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 SCNN1AP37088 669 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 ARCN1P48444 511 aaKnown RBP13.1□□□□□ -0.31
SNRPF-203ENST00000551316 SCNN1BP51168 640 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 HSD11B2P80365 405 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 CRTC3Q6UUV7 619 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 BPHLQ86WA6 291 aaPredicted RBP13.1□□□□□ -0.31
SNRPF-203ENST00000551316 PHYKPLQ8IUZ5 450 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 LZTR1Q8N653 840 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 EPS8L1Q8TE68 723 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 MCCC1Q96RQ3 725 aaPredicted RBP13.1□□□□□ -0.31
SNRPF-203ENST00000551316 UBE2TQ9NPD8 197 aaPredicted RBP13.1□□□□□ -0.31
SNRPF-203ENST00000551316 ATP13A2Q9NQ11 1180 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 POT1Q9NUX5 634 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 TRIM10Q9UDY6 481 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 CDYLQ9Y232 598 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 WDR37Q9Y2I8 494 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 MEMO1Q9Y316 297 aa13.1□□□□□ -0.31
SNRPF-203ENST00000551316 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 PDZK1P1A8MUH7 402 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 PEX12O00623 359 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 PMM2O15305 246 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 F10P00742 488 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 EPHB2P29323 1055 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 POLR2LP62875 67 aaKnown RBP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 TFF3Q07654 80 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 SSPNQ14714 243 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 RABEP1Q15276 862 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 PARP15Q460N3 678 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 DNTTIP2Q5QJE6 756 aaKnown RBP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 MLIPQ5VWP3 458 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 C3P1Q6ZMU1 363 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 UMODL1-AS1Q8N2C9 162 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 PGBD5Q8N414 524 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 AOPEPQ8N6M6 819 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 EHBP1Q8NDI1 1231 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 METTL5Q9NRN9 209 aaKnown RBP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 SAMSN1Q9NSI8 373 aaKnown RBP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 PLA2G3Q9NZ20 509 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 ATXN10Q9UBB4 475 aa13.09□□□□□ -0.31
SNRPF-203ENST00000551316 SONP18583 2426 aaKnown RBP13.09□□□□□ -0.31
SNRPF-203ENST00000551316 HIVEP2P31629 2446 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 NKX2-6A6NCS4 301 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 TMEM150CB9EJG8 249 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 INAFM1C9JVW0 142 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 AGPSO00116 658 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 NUAK1O60285 661 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 ESRRAP11474 423 aaPredicted RBP13.08□□□□□ -0.32
SNRPF-203ENST00000551316 PFKFB1P16118 471 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 IL4RP24394 825 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 USP8P40818 1118 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 FOLR3P41439 243 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 ARL4DP49703 201 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 KPNA2P52292 529 aaKnown RBP13.08□□□□□ -0.32
SNRPF-203ENST00000551316 YBEYP58557 167 aaPredicted RBP13.08□□□□□ -0.32
SNRPF-203ENST00000551316 PTSQ03393 145 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 AIMP2Q13155 320 aaKnown RBP13.08□□□□□ -0.32
SNRPF-203ENST00000551316 C1orf189Q5VU69 101 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 AGAP7PQ5VUJ5 663 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms