RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 DCP2Q8IU60 420 aaKnown RBP12.12□□□□□ -0.47
ERBB3-219ENST00000551242 LACC1Q8IV20 430 aa12.12□□□□□ -0.47
ERBB3-219ENST00000551242 SYTL1Q8IYJ3 562 aa12.12□□□□□ -0.47
ERBB3-219ENST00000551242 ZHX1-C8orf76Q96EF9 292 aa12.12□□□□□ -0.47
ERBB3-219ENST00000551242 HSFY1Q96LI6 401 aa12.12□□□□□ -0.47
ERBB3-219ENST00000551242 VAT1Q99536 393 aa12.12□□□□□ -0.47
ERBB3-219ENST00000551242 GPR20Q99678 358 aa12.12□□□□□ -0.47
ERBB3-219ENST00000551242 FSD1LQ9BXM9 530 aa12.12□□□□□ -0.47
ERBB3-219ENST00000551242 WDR6Q9NNW5 1121 aaKnown RBP12.12□□□□□ -0.47
ERBB3-219ENST00000551242 DDX28Q9NUL7 540 aaKnown RBP12.12□□□□□ -0.47
ERBB3-219ENST00000551242 LEF1Q9UJU2 399 aaPredicted RBP12.12□□□□□ -0.47
ERBB3-219ENST00000551242 GJD2Q9UKL4 321 aa12.12□□□□□ -0.47
ERBB3-219ENST00000551242 AAR2Q9Y312 384 aaKnown RBP12.12□□□□□ -0.47
ERBB3-219ENST00000551242 LCTP09848 1927 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 MIA3Q5JRA6 1907 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 A8MV72 311 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-219ENST00000551242 TULP3O75386 442 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 CRCPO75575 148 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 PAMP19021 973 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 ACVR2AP27037 513 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 PRDX3P30048 256 aaKnown RBP12.11□□□□□ -0.47
ERBB3-219ENST00000551242 CLK3P49761 638 aaKnown RBP12.11□□□□□ -0.47
ERBB3-219ENST00000551242 SMN1Q16637 294 aaKnown RBP12.11□□□□□ -0.47
ERBB3-219ENST00000551242 SPATS1Q496A3 300 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 ZNF691Q5VV52 312 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 SVOPQ8N4V2 548 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 DCBLD1Q8N8Z6 715 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 DPF3Q92784 378 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 ACOX2Q99424 681 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 PLEKHA5Q9HAU0 1116 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 ZBTB20Q9HC78 741 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-219ENST00000551242 DDIT4Q9NX09 232 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 OR12D3Q9UGF7 316 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 AKT3Q9Y243 479 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 PARP14Q460N5 1801 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 DNAJB5O75953 348 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 EGFRP00533 1210 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 HPRP00739 348 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 NTRK1P04629 796 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 ANXA6P08133 673 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 FGF4P08620 206 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 PRKCAP17252 672 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 ALOX12P18054 663 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 GRK3P35626 688 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 OAZ1P54368 228 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 IL1RL1Q01638 556 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 TOP3AQ13472 1001 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-219ENST00000551242 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 OR4D1Q15615 310 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 KIAA0930Q6ICG6 404 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-219ENST00000551242 RFPL4BQ6ZWI9 263 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 BNIPLQ7Z465 357 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 PJA1Q8NG27 643 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 OR6P1Q8NGX9 317 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 PROX1Q92786 737 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 COPS5Q92905 334 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 TEPSINQ96N21 525 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 FAM49AQ9H0Q0 323 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-219ENST00000551242 OPTCQ9UBM4 332 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 LIMD1Q9UGP4 676 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 MAGEL2Q9UJ55 1249 aa12.11□□□□□ -0.47
ERBB3-219ENST00000551242 ISPDA4D126 451 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 NDST3O95803 873 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 MT-ND2P03891 347 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 ST13P50502 369 aaKnown RBP12.1□□□□□ -0.47
ERBB3-219ENST00000551242 CLCN5P51795 746 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 SIM2Q14190 667 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-219ENST00000551242 ACOX1Q15067 660 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 GDPD3Q7L5L3 318 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 B3GNT8Q7Z7M8 397 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 UNC93AQ86WB7 457 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 HID1Q8IV36 788 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-219ENST00000551242 NLGN4XQ8N0W4 816 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 METTL4Q8N3J2 472 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 OR10Q1Q8NGQ4 319 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 TSPAN17Q96FV3 270 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 AIG1Q9NVV5 245 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 MARCH4Q9P2E8 410 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-219ENST00000551242 OSGIN1Q9UJX0 560 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 ADAMTS5Q9UNA0 930 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 FAM172BPA6NC97 362 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 BCKDKO14874 412 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 LCKP06239 509 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 MTHFD2P13995 350 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 CD36P16671 472 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 PFKLP17858 780 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 DNAJB2P25686 324 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 CLCNKBP51801 687 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 SYT16Q17RD7 645 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 EDEM1Q92611 657 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 ISG20Q96AZ6 181 aaKnown RBP12.1□□□□□ -0.47
ERBB3-219ENST00000551242 PYCR2Q96C36 320 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 DMRTB1Q96MA1 342 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 ARPC5LQ9BPX5 153 aa12.1□□□□□ -0.47
ERBB3-219ENST00000551242 RBM4BQ9BQ04 359 aaKnown RBP12.1□□□□□ -0.47
ERBB3-219ENST00000551242 RBM4Q9BWF3 364 aaKnown RBP12.1□□□□□ -0.47
ERBB3-219ENST00000551242 DCSTAMPQ9H295 470 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms