RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, human

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2B1-208	ENST00000551009	SCCPDH	Q8NBX0	429 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	ZNF540	Q8NDQ6	660 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	PRPF31	Q8WWY3	499 aa	Known RBP	4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	ARHGEF2	Q92974	986 aa	Known RBP	4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	TRIM44	Q96DX7	344 aa	Predicted RBP	4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	HES6	Q96HZ4	224 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	VPS39	Q96JC1	886 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	IL17F	Q96PD4	163 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	TMEM237	Q96Q45	408 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	PKP4	Q99569	1192 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	TRIM6	Q9C030	488 aa	Predicted RBP	4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	OPA3	Q9H6K4	179 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	SNTG1	Q9NSN8	517 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	KCND2	Q9NZV8	630 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	SARDH	Q9UL12	918 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	KCNE2	Q9Y6J6	123 aa		4.6	□□□□□ -1.67
ATP2B1-208	ENST00000551009	hDV102S1	A0JD36	115 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	NPIPB11	E5RHQ5	1161 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	ZIC3	O60481	467 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	PMS2P2	O95744	297 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	EIF2S1	P05198	315 aa	Known RBP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	MMP2	P08253	660 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	AGA	P20933	346 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	KCNA5	P22460	613 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	SSTR2	P30874	369 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	STX2	P32856	288 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	PIGA	P37287	484 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	GARS	P41250	739 aa	Known RBP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	LIG4	P49917	911 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	TKTL1	P51854	596 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	GOLGA8DP	Q0D2H9	430 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	CBX3	Q13185	183 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	VEPH1	Q14D04	833 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	OASL	Q15646	514 aa	Known RBP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	WSCD2	Q2TBF2	565 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	ZNF805	Q5CZA5	627 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	ZNF667	Q5HYK9	610 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	TMEM81	Q6P7N7	255 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	KLHL35	Q6PF15	583 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	PPP1R42	Q7Z4L9	355 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	GPAT4	Q86UL3	456 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	PLD5	Q8N7P1	536 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	POC5	Q8NA72	575 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	DENND6B	Q8NEG7	585 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	AGBL3	Q8NEM8	1001 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	SPATA20	Q8TB22	786 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	SYAP1	Q96A49	352 aa	Predicted RBP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	SLC22A18	Q96BI1	424 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	FBXL8	Q96CD0	374 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	PPP1R13B	Q96KQ4	1090 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	CCDC114	Q96M63	670 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	CMTM3	Q96MX0	182 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	DACH2	Q96NX9	599 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	GCNA	Q96QF7	691 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	NT5C3A	Q9H0P0	336 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	SH2D4A	Q9H788	454 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	UBTD1	Q9HAC8	227 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	EBF2	Q9HAK2	575 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	MCM9	Q9NXL9	1143 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	DDX43	Q9NXZ2	648 aa	Known RBP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	COQ3	Q9NZJ6	369 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	CWC15	Q9P013	229 aa	Known RBP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	EXTL2	Q9UBQ6	330 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	SEC63	Q9UGP8	760 aa	Known RBP	4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	LIPT1	Q9Y234	373 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009	AP1M2	Q9Y6Q5	423 aa		4.59	□□□□□ -1.67
ATP2B1-208	ENST00000551009		A0A0B4J293	547 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	hCG_1809904	A0A1W2PP81	198 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009		A0A1W2PPE2	198 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009		A0A1W2PR64	198 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	LRRD1	A4D1F6	860 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	TULP2	O00295	520 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	ZNF263	O14978	683 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	PGRMC2	O15173	223 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	TNFSF14	O43557	240 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	BUB3	O43684	328 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	HNRNPCL1	O60812	293 aa	Known RBP	4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	KIN	O60870	393 aa	Known RBP	4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	PALM	O75781	387 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	APBB3	O95704	486 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	MT-CYB	P00156	380 aa	Predicted RBP	4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	HEXB	P07686	556 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	GALT	P07902	379 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	UMOD	P07911	640 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	IRF1	P10914	325 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	RARG	P13631	454 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	ETFA	P13804	333 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	FDPS	P14324	419 aa	Known RBP	4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	DDX5	P17844	614 aa	Known RBP	4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	TCEA1	P23193	301 aa	Known RBP	4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	PTAFR	P25105	342 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	POU1F1	P28069	291 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	HOXC8	P31273	242 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	HSPA4	P34932	840 aa		4.58	□□□□□ -1.68
ATP2B1-208	ENST00000551009	PSMC4	P43686	418 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms