RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 DAOAP59103 153 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 UBE2HP62256 183 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 GCNT1Q02742 428 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 CSTF1Q05048 431 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 KDSRQ06136 332 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 ADIGQ0VDE8 80 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 LRMPQ12912 555 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 TRPC3Q13507 836 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 ENPP2Q13822 863 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 PDGFRLQ15198 375 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 MAPRE1Q15691 268 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 ARHGAP15Q53QZ3 475 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 RAB6CQ53S08 254 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 FAM133BQ5BKY9 247 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 PCID2Q5JVF3 399 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 DEPDC1Q5TB30 811 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 MSANTD2Q6P1R3 559 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 DENND1BQ6P3S1 775 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 LCLAT1Q6UWP7 414 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 RRAGAQ7L523 313 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 BNIPLQ7Z465 357 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 WDR5BQ86VZ2 330 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 GAS2L3Q86XJ1 694 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 SLC15A3Q8IY34 581 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 CHPFQ8IZ52 775 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 SCML4Q8N228 414 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 RPLP0P6Q8NHW5 317 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 XAGE5Q8WWM1 108 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 SHC3Q92529 594 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 CNOT6LQ96LI5 555 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 SYT11Q9BT88 431 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 FUCA2Q9BTY2 467 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 ULBP1Q9BZM6 244 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 INTS2Q9H0H0 1204 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 RAB6CQ9H0N0 254 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 SMURF2Q9HAU4 748 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 ZSCAN32Q9NX65 697 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 DUS2Q9NX74 493 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 CHMP5Q9NZZ3 219 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 UXTQ9UBK9 157 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 ARMCX3Q9UH62 379 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 XPO7Q9UIA9 1087 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 STOML2Q9UJZ1 356 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 NEU3Q9UQ49 428 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 ATP6V1DQ9Y5K8 247 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 ANKRD11Q6UB99 2663 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 ATMQ13315 3056 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 MED19A0JLT2 244 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 RNF103O00237 685 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 XPO1O14980 1071 aaKnown RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 CETN3O15182 167 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 TULP3O75386 442 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 RTN3O95197 1032 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 SCGB1D2O95969 90 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 IRF1P10914 325 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 MBL2P11226 248 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 RARGP13631 454 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF18P17022 549 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 PON1P27169 355 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 HOXD9P28356 352 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 SLC7A1P30825 629 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 EIF2DP41214 584 aaKnown RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 BCAT1P54687 386 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 SLC10A2Q12908 348 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 SLC13A2Q13183 592 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 BECN1Q14457 450 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 LLGL1Q15334 1064 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 TAF5Q15542 800 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 LPAL2Q16609 132 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 PLA1AQ53H76 456 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 TCEAL6Q6IPX3 200 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 NAPRTQ6XQN6 538 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 PARS2Q7L3T8 475 aaKnown RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 KBTBD6Q86V97 674 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF683Q8IZ20 524 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 MPP5Q8N3R9 675 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 ALLCQ8N6M5 410 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 TRIML1Q8N9V2 468 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 TERB1Q8NA31 727 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 ANKRD52Q8NB46 1076 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 OR52K2Q8NGK3 314 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 RP9Q8TA86 221 aaKnown RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 UBA3Q8TBC4 463 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 CD101Q93033 1021 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 SECISBP2LQ93073 1101 aaKnown RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 ATP2A3Q93084 1043 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 TCEAL3Q969E4 200 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 SLC39A13Q96H72 371 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 TNIP3Q96KP6 325 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 P2RY13Q9BPV8 354 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 MACROD1Q9BQ69 325 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 CRACR2AQ9BSW2 395 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 FSD1LQ9BXM9 530 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 FAM124BQ9H5Z6 455 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 SAMSN1Q9NSI8 373 aaKnown RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 RMND1Q9NWS8 449 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 COMMD8Q9NX08 183 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 CLIC5Q9NZA1 410 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF212Q9UDV6 495 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms