RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 RBMS2Q15434 407 aaKnown RBP5.65□□□□□ -1.5
HCFC2-204ENST00000550335 TRIP6Q15654 476 aaKnown RBP5.65□□□□□ -1.5
HCFC2-204ENST00000550335 CDC37Q16543 378 aaPredicted RBP5.65□□□□□ -1.5
HCFC2-204ENST00000550335 NHSL2Q5HYW2 709 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 FNBP1LQ5T0N5 605 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 IYDQ6PHW0 289 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 C11orf88Q6PI97 169 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 DET1Q7L5Y6 550 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 FOXRED2Q8IWF2 684 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 CTCFLQ8NI51 663 aaPredicted RBP5.65□□□□□ -1.5
HCFC2-204ENST00000550335 OIT3Q8WWZ8 545 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 CHFRQ96EP1 664 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 FAM81BQ96LP2 452 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 NLRP4Q96MN2 994 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 DACH2Q96NX9 599 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 MS4A10Q96PG2 267 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 MTERF1Q99551 399 aaKnown RBP5.65□□□□□ -1.5
HCFC2-204ENST00000550335 ABHD6Q9BV23 337 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 SCAND2PQ9GZW5 306 aaPredicted RBP5.65□□□□□ -1.5
HCFC2-204ENST00000550335 SEMA6AQ9H2E6 1030 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 WDR26Q9H7D7 661 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 C17orf75Q9HAS0 396 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 TINAGQ9UJW2 476 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 LOXL2Q9Y4K0 774 aa5.65□□□□□ -1.5
HCFC2-204ENST00000550335 WDR97A6NE52 1622 aa5.65□□□□□ -1.51
HCFC2-204ENST00000550335 KRTAP9-6A0A140TA67 174 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 RPS10-NUDT3A0A1W2PQS6 291 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 VWA5AO00534 786 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 ANKRD28O15084 1053 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 XRCC3O43542 346 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 SSX4O60224 188 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 TSPAN1O60635 241 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 NDUFS7O75251 213 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 EPN2O95208 641 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 GNLYP22749 145 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 TCEA1P23193 301 aaKnown RBP5.64□□□□□ -1.51
HCFC2-204ENST00000550335 HOXC8P31273 242 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 APOBEC1P41238 236 aaKnown RBP5.64□□□□□ -1.51
HCFC2-204ENST00000550335 RASSF2P50749 326 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 HNRNPH2P55795 449 aaKnown RBP5.64□□□□□ -1.51
HCFC2-204ENST00000550335 PLA2G7Q13093 441 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 MELKQ14680 651 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 ZNF674Q2M3X9 581 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 VWC2Q2TAL6 325 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 ODF3L2Q3SX64 289 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 RNASEH2BQ5TBB1 312 aaKnown RBP5.64□□□□□ -1.51
HCFC2-204ENST00000550335 PLA2G4FQ68DD2 849 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 PCSK4Q6UW60 755 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 RAPH1Q70E73 1250 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 ADGRG3Q86Y34 549 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 UNC45BQ8IWX7 931 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 OR2AK2Q8NG84 335 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 EXD1Q8NHP7 514 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 STAMBPL1Q96FJ0 436 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 NEK1Q96PY6 1258 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 CSF3RQ99062 836 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 GFI1Q99684 422 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 KATNB1Q9BVA0 655 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 DNAI2Q9GZS0 605 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 NOX4Q9NPH5 578 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 EQTNQ9NQ60 294 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 STK26Q9P289 416 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 ARMCX3Q9UH62 379 aaPredicted RBP5.64□□□□□ -1.51
HCFC2-204ENST00000550335 IL17BQ9UHF5 180 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 RAI2Q9Y5P3 530 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 INSL5Q9Y5Q6 135 aa5.64□□□□□ -1.51
HCFC2-204ENST00000550335 POLA1P09884 1462 aaPredicted RBP5.64□□□□□ -1.51
HCFC2-204ENST00000550335 A0A1B0GVT2 93 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 A4D1N5 150 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 WIPF3A6NGB9 483 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 ANXA2P2A6NMY6 339 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 TRIM77I1YAP6 450 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 CNOT3O75175 753 aaKnown RBP5.63□□□□□ -1.51
HCFC2-204ENST00000550335 CH25HO95992 272 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 GBAP04062 536 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 NUDT6P53370 316 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 KRTAP10-2P60368 255 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 PTPRCAPQ14761 206 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 MVPQ14764 893 aaKnown RBP5.63□□□□□ -1.51
HCFC2-204ENST00000550335 SYT16Q17RD7 645 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 DNTTIP2Q5QJE6 756 aaKnown RBP5.63□□□□□ -1.51
HCFC2-204ENST00000550335 SFMBT2Q5VUG0 894 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 FRG2Q64ET8 278 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 C18orf63Q68DL7 685 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 SPATA19Q7Z5L4 167 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 SLC5A8Q8N695 610 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 ARFGAP1Q8N6T3 406 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 ACVR1CQ8NER5 493 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 SLC44A1Q8WWI5 657 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 DNAAF4Q8WXU2 420 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 TAAR8Q969N4 342 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 HES6Q96HZ4 224 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 CCDC43Q96MW1 224 aaKnown RBP5.63□□□□□ -1.51
HCFC2-204ENST00000550335 OR6C1Q96RD1 312 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 CRAMP1Q96RY5 1269 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 INTS14Q96SY0 518 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 PCYT2Q99447 389 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 DBNDD1Q9H9R9 158 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 PLAC1Q9HBJ0 212 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms