RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TSPAN17Q96FV3 270 aa12□□□□□ -0.49
VDR-208ENST00000550325 VMP1Q96GC9 406 aa12□□□□□ -0.49
VDR-208ENST00000550325 ACTR8Q9H981 624 aa12□□□□□ -0.49
VDR-208ENST00000550325 ZNF408Q9H9D4 720 aa12□□□□□ -0.49
VDR-208ENST00000550325 RGS18Q9NS28 235 aa12□□□□□ -0.49
VDR-208ENST00000550325 THG1LQ9NWX6 298 aaKnown RBP12□□□□□ -0.49
VDR-208ENST00000550325 ANGPTL3Q9Y5C1 460 aa12□□□□□ -0.49
VDR-208ENST00000550325 MICAL3Q7RTP6 2002 aa12□□□□□ -0.49
VDR-208ENST00000550325 TTC34A8MYJ7 566 aa12□□□□□ -0.49
VDR-208ENST00000550325 ZNF487B1APH4 448 aa12□□□□□ -0.49
VDR-208ENST00000550325 DCLK1O15075 740 aa12□□□□□ -0.49
VDR-208ENST00000550325 RGS5O15539 181 aa12□□□□□ -0.49
VDR-208ENST00000550325 IFI30P13284 250 aa12□□□□□ -0.49
VDR-208ENST00000550325 PTPN2P17706 415 aa12□□□□□ -0.49
VDR-208ENST00000550325 IFNA8P32881 189 aa12□□□□□ -0.49
VDR-208ENST00000550325 CLCA4Q14CN2 919 aa12□□□□□ -0.49
VDR-208ENST00000550325 PAFAH1B3Q15102 231 aaKnown RBP12□□□□□ -0.49
VDR-208ENST00000550325 WDR45BQ5MNZ6 344 aa12□□□□□ -0.49
VDR-208ENST00000550325 KCTD11Q693B1 232 aa12□□□□□ -0.49
VDR-208ENST00000550325 LRRC8DQ7L1W4 858 aa12□□□□□ -0.49
VDR-208ENST00000550325 PROSER1Q86XN7 944 aa12□□□□□ -0.49
VDR-208ENST00000550325 EID3Q8N140 333 aa12□□□□□ -0.49
VDR-208ENST00000550325 ATPAF2Q8N5M1 289 aa12□□□□□ -0.49
VDR-208ENST00000550325 OR10A6Q8NH74 314 aa12□□□□□ -0.49
VDR-208ENST00000550325 PPP1R13LQ8WUF5 828 aa12□□□□□ -0.49
VDR-208ENST00000550325 COPS5Q92905 334 aa12□□□□□ -0.49
VDR-208ENST00000550325 AURKBQ96GD4 344 aaPredicted RBP12□□□□□ -0.49
VDR-208ENST00000550325 SPATA33Q96N06 139 aa12□□□□□ -0.49
VDR-208ENST00000550325 ROGDIQ9GZN7 287 aa12□□□□□ -0.49
VDR-208ENST00000550325 NUAK2Q9H093 628 aa12□□□□□ -0.49
VDR-208ENST00000550325 FZD8Q9H461 694 aa12□□□□□ -0.49
VDR-208ENST00000550325 ASB7Q9H672 318 aa12□□□□□ -0.49
VDR-208ENST00000550325 OR12D3Q9UGF7 316 aa12□□□□□ -0.49
VDR-208ENST00000550325 INTS6Q9UL03 887 aaKnown RBP12□□□□□ -0.49
VDR-208ENST00000550325 SHROOM3Q8TF72 1996 aa12□□□□□ -0.49
VDR-208ENST00000550325 ARNTP27540 789 aa12□□□□□ -0.49
VDR-208ENST00000550325 EIF2DP41214 584 aaKnown RBP12□□□□□ -0.49
VDR-208ENST00000550325 TKTL1P51854 596 aa12□□□□□ -0.49
VDR-208ENST00000550325 DET1Q7L5Y6 550 aa12□□□□□ -0.49
VDR-208ENST00000550325 NIM1KQ8IY84 436 aa12□□□□□ -0.49
VDR-208ENST00000550325 CADM2Q8N3J6 435 aa12□□□□□ -0.49
VDR-208ENST00000550325 RPRD1BQ9NQG5 326 aaKnown RBP12□□□□□ -0.49
VDR-208ENST00000550325 AAR2Q9Y312 384 aaKnown RBP12□□□□□ -0.49
VDR-208ENST00000550325 KRT87PA6NCN2 255 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 PRKD3O94806 890 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 GABARAPO95166 117 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 ENDOUP21128 410 aaKnown RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 CDKN2DP55273 166 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 MAXP61244 160 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 GHRHRQ02643 423 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 TOP3AQ13472 1001 aaPredicted RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 ZNF404Q494X3 552 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 TPRG1LQ5T0D9 272 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 PEX5LQ8IYB4 626 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 PIK3C3Q8NEB9 887 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 PTERQ96BW5 349 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 FAM167AQ96KS9 214 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 MBOAT4Q96T53 435 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 LRRC3Q9BY71 257 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 TUBB1Q9H4B7 451 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 KAT8Q9H7Z6 458 aaKnown RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 PRMT7Q9NVM4 692 aaPredicted RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 RBM22Q9NW64 420 aaKnown RBP eCLIP11.99□□□□□ -0.49
VDR-208ENST00000550325 SNX6Q9UNH7 406 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 FAM50BQ9Y247 325 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 TPRKBQ9Y3C4 175 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 AIREO43918 545 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 AZGP1P25311 298 aaKnown RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 HERVK_113P63132 956 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 AAK1Q2M2I8 961 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 MILR1Q7Z6M3 343 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 METTL4Q8N3J2 472 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 BEST2Q8NFU1 509 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 ERVK-6Q9BXR3 956 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 TKTL2Q9H0I9 626 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 WDCPQ9H6R7 721 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 RCOR3Q9P2K3 495 aaPredicted RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 MAGEL2Q9UJ55 1249 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 WBP11Q9Y2W2 641 aaKnown RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 AP3D1O14617 1153 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 MTSS1O43312 755 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 CDK5R2Q13319 367 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 PKDCCQ504Y2 493 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 CEP78Q5JTW2 689 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 ATAD3CQ5T2N8 411 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 UBE2J2Q8N2K1 259 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 CDYL2Q8N8U2 506 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 DYNC2LI1Q8TCX1 351 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 RBM4BQ9BQ04 359 aaKnown RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 RBM4Q9BWF3 364 aaKnown RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 UGT2B28Q9BY64 529 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 FAM49AQ9H0Q0 323 aaPredicted RBP11.99□□□□□ -0.49
VDR-208ENST00000550325 GOLGA2P5Q9HBQ8 144 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 KIAA1217Q5T5P2 1943 aa11.99□□□□□ -0.49
VDR-208ENST00000550325 TBKBP1A7MCY6 615 aa11.98□□□□□ -0.49
VDR-208ENST00000550325 TSPAN3O60637 253 aa11.98□□□□□ -0.49
VDR-208ENST00000550325 ICMTO60725 284 aa11.98□□□□□ -0.49
VDR-208ENST00000550325 BEST1O76090 585 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms