RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 KRT14P02533 472 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 ZSCAN5DPP0CG00 497 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 THRAP10827 490 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 FGF3P11487 239 aaPredicted RBP13.26□□□□□ -0.29
NUP188-211ENST00000550219 WT1P19544 449 aaPredicted RBP13.26□□□□□ -0.29
NUP188-211ENST00000550219 CD82P27701 267 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 ATP1A2P50993 1020 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 LIMK2P53671 638 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 NFATC2Q13469 925 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 PTK6Q13882 451 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 LRP8Q14114 963 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 SLC14A2Q15849 920 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 CLPPQ16740 277 aaPredicted RBP13.26□□□□□ -0.29
NUP188-211ENST00000550219 QPCTQ16769 361 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 PARP6Q2NL67 630 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 GLE1Q53GS7 698 aaKnown RBP13.26□□□□□ -0.29
NUP188-211ENST00000550219 ITPRIPL1Q6GPH6 555 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 NRSN1Q8IZ57 195 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 LRRN4CLQ8ND94 238 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 AGBL5Q8NDL9 886 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 OR4D9Q8NGE8 314 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 ART4Q93070 314 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 IMP4Q96G21 291 aaKnown RBP13.26□□□□□ -0.29
NUP188-211ENST00000550219 SCARF2Q96GP6 870 aaPredicted RBP13.26□□□□□ -0.29
NUP188-211ENST00000550219 COX14Q96I36 57 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 GORASP1Q9BQQ3 440 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 GBA3Q9H227 469 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 STN1Q9H668 368 aaKnown RBP13.26□□□□□ -0.29
NUP188-211ENST00000550219 ARFGAP3Q9NP61 516 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 MGAQ8IWI9 3026 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 EFCAB7A8K855 629 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 A8MU76 341 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 TTI1O43156 1089 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 DNAJC6O75061 913 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 SLU7O95391 586 aaKnown RBP13.25□□□□□ -0.29
NUP188-211ENST00000550219 METTL18O95568 372 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 MMP2P08253 660 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 FAM87AP0C7U9 286 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 PIRTP0C851 137 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 IVDP26440 423 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 FDFT1P37268 417 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 SPINT3P49223 89 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 RPL26P61254 145 aaKnown RBP13.25□□□□□ -0.29
NUP188-211ENST00000550219 HHEXQ03014 270 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 TRA2AQ13595 282 aaKnown RBP eCLIP13.25□□□□□ -0.29
NUP188-211ENST00000550219 PCSK7Q16549 785 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 PLA2G4EQ3MJ16 856 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 LINC00303Q3SY05 128 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 HENMT1Q5T8I9 393 aaKnown RBP13.25□□□□□ -0.29
NUP188-211ENST00000550219 ARHGEF18Q6ZSZ5 1173 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 LYSMD3Q7Z3D4 306 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 KDELC2Q7Z4H8 507 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 IL22RA1Q8N6P7 574 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 EXD3Q8N9H8 876 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 OR10G6Q8NH81 332 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 CCHCR1Q8TD31 782 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 TAAR9Q96RI9 348 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 MLPHQ9BV36 600 aaPredicted RBP13.25□□□□□ -0.29
NUP188-211ENST00000550219 OSGEPL1Q9H4B0 414 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 SLC39A1Q9NY26 324 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 VPS18Q9P253 973 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 KLHL3Q9UH77 587 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 RPL26L1Q9UNX3 145 aaKnown RBP13.25□□□□□ -0.29
NUP188-211ENST00000550219 HEMK1Q9Y5R4 338 aaPredicted RBP13.25□□□□□ -0.29
NUP188-211ENST00000550219 B3GALT1Q9Y5Z6 326 aa13.25□□□□□ -0.29
NUP188-211ENST00000550219 NFKB1P19838 968 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 PSMB4P28070 264 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 MAGEA6P43360 314 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 FASLGP48023 281 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 ARSDP51689 593 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 TUBB4BP68371 445 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 GPLD1P80108 840 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 NFKB2Q00653 900 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 SEMA5AQ13591 1074 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 PPP1R7Q15435 360 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 TRIP13Q15645 432 aaPredicted RBP13.24□□□□□ -0.29
NUP188-211ENST00000550219 ZNF648Q5T619 568 aaPredicted RBP13.24□□□□□ -0.29
NUP188-211ENST00000550219 TMEM71Q6P5X7 295 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 CRTC3Q6UUV7 619 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 DTX1Q86Y01 620 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 SFRP1Q8N474 314 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 SEC14L1Q92503 715 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 OXNAD1Q96HP4 312 aaPredicted RBP13.24□□□□□ -0.29
NUP188-211ENST00000550219 PPP1R2P1Q96PQ5 205 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 LYSMD1Q96S90 227 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 ERP44Q9BS26 406 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 TRIM51Q9BSJ1 452 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 LRRC1Q9BTT6 524 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 SPATA16Q9BXB7 569 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 ADGRE3Q9BY15 652 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 TRIM4Q9C037 500 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 FAM117AQ9C073 453 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 FAM83DQ9H4H8 585 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 ETNK1Q9HBU6 452 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 OCIAD1Q9NX40 245 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 TBC1D29Q9UFV1 150 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 RSPH14Q9UHP6 348 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 SHOC2Q9UQ13 582 aa13.24□□□□□ -0.29
NUP188-211ENST00000550219 ARHGEF17Q96PE2 2063 aaPredicted RBP13.24□□□□□ -0.29
NUP188-211ENST00000550219 ANKRD66B4E2M5 251 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms