RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 C2CD4AQ8NCU7 369 aaPredicted RBP10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 KBTBD8Q8NFY9 601 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 FAR1Q8WVX9 515 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 APOLD1Q96LR9 279 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 SMOQ99835 787 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 TPK1Q9H3S4 243 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 OCEL1Q9H607 264 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 TRIM39Q9HCM9 518 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 GNPTGQ9UJJ9 305 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 OGDHLQ9ULD0 1010 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 SATB2Q9UPW6 733 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 SH3BP1Q9Y3L3 701 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 FAM234BA2RU67 622 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 ZNF99A8MXY4 864 aaPredicted RBP10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 SLC28A1O00337 649 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 CCNKO75909 580 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 PRKD3O94806 890 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 CKMP06732 381 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 GNAO1P09471 354 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 COL6A1P12109 1028 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 SMPD1P17405 629 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 TYMPP19971 482 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 RAB15P59190 212 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 ZNF280AP59817 542 aaPredicted RBP10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 MRPS6P82932 125 aaKnown RBP10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 DNASE1L3Q13609 305 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 SYT16Q17RD7 645 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 TECRLQ5HYJ1 363 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 ZNF678Q5SXM1 525 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 PIK3C3Q8NEB9 887 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 OR7D4Q8NG98 312 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 SLC13A3Q8WWT9 602 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 GAB3Q8WWW8 586 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 NSMCE3Q96MG7 304 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 DNAJB9Q9UBS3 223 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 AURKAO14965 403 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 TLR5O60602 858 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 NIPSNAP2O75323 286 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 ECI2O75521 394 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 PGLSO95336 258 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 BMP10O95393 424 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 CDH1P12830 882 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 DNAJB13P59910 316 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 NCF4Q15080 339 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 DENND5AQ6IQ26 1287 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 GPR142Q7Z601 462 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 TTC30BQ8N4P2 665 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 ARRDC4Q8NCT1 418 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 C19orf18Q8NEA5 215 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 IRGQQ8WZA9 623 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 MYDGFQ969H8 173 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 ITCHQ96J02 903 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 TMEM209Q96SK2 561 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 CGREF1Q99674 301 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 SNX6Q9UNH7 406 aa10.12□□□□□ -0.79
SMARCC2-209ENST00000550164 IGKV6D-21A0A0A0MT36 114 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 VILLO15195 856 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 UGT2B11O75310 529 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 SERPINA1P01009 418 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 EFNA1P20827 205 aaPredicted RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 PROZP22891 400 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ATP5C1P36542 298 aaKnown RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 HMGCS1Q01581 520 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 BCL2L1Q07817 233 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 PMS2P3Q13401 168 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 MADCAM1Q13477 382 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 TIMM50Q3ZCQ8 353 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 TIGD5Q53EQ6 642 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 DGKKQ5KSL6 1271 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 RETSATQ6NUM9 610 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ZNF773Q6PK81 442 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 CILP2Q8IUL8 1156 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ZDHHC21Q8IVQ6 265 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ENKURQ8TC29 256 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 BRSK1Q8TDC3 778 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 KCTD13Q8WZ19 329 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ZUFSPQ96AP4 578 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 SLC45A3Q96JT2 553 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 NFKBIZQ9BYH8 718 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 MTMR10Q9NXD2 777 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 MTRRQ9UBK8 725 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 FKBPLQ9UIM3 349 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 KIAA1551Q9HCM1 1747 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 AIREO43918 545 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 GRK4P32298 578 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 SLC26A3P40879 764 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 GRIA2P42262 883 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ACADVLP49748 655 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 BCAP31P51572 246 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ARSFP54793 590 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 TAF10Q12962 218 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 STARD3Q14849 445 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 HIST2H2ACQ16777 129 aaPredicted RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 SIRPB2Q5JXA9 342 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 HIST2H2AA3Q6FI13 130 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 CYP20A1Q6UW02 462 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ZNF420Q8TAQ5 688 aaPredicted RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 VPS35Q96QK1 796 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 OLFM1Q99784 485 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms