RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TDRD12Q587J7 1177 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF569Q5MCW4 686 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 HIST2H2BCQ6DN03 193 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 PWWP2BQ6NUJ5 590 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF517Q6ZMY9 492 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 C11orf96Q7Z7L8 435 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 SYVN1Q86TM6 617 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 KMT5CQ86Y97 462 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 CNTD1Q8N815 330 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 RSC1A1Q92681 617 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 FAF2Q96CS3 445 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 HDAC11Q96DB2 347 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 ELMO2Q96JJ3 720 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 BTBD6Q96KE9 485 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 TRIB3Q96RU7 358 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 SRPK1Q96SB4 655 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF670Q9BS34 389 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 NUP85Q9BW27 656 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 TRIM55Q9BYV6 548 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 THAP2Q9H0W7 228 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 AKIRIN1Q9H9L7 192 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 ARFGAP3Q9NP61 516 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 LNPEPQ9UIQ6 1025 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 ANAPC7Q9UJX3 599 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 FARSAQ9Y285 508 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 PCDHGB7Q9Y5F8 929 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 BZW2Q9Y6E2 419 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 RP1L1Q8IWN7 2480 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 IGHV5-51A0A0C4DH38 117 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 WIPF3A6NGB9 483 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 PDZK1P1A8MUH7 402 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 SMAPO00193 183 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 SEMA7AO75326 666 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 CEACAM4O75871 244 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 DNAJB5O75953 348 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 SORBS2O94875 1100 aaKnown RBP9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 CDK14O94921 469 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 DDAH2O95865 285 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 JCHAINP01591 159 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 FOLR1P15328 257 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 VARSP26640 1264 aaKnown RBP9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 RPL10P27635 214 aaKnown RBP9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 CD86P42081 329 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 RPS15P62841 145 aaKnown RBP9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 ACY1Q03154 408 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 GBE1Q04446 702 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 TMEM115Q12893 351 aaPredicted RBP9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 NADK2Q4G0N4 442 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 FILIP1LQ4L180 1135 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 FIGNQ5HY92 759 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 HGSNATQ68CP4 663 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 KLHL35Q6PF15 583 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 FAM92BQ6ZTR7 304 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 HPS6Q86YV9 775 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 MAP7D3Q8IWC1 876 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 PQLC3Q8N755 202 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 SIDT2Q8NBJ9 832 aaKnown RBP9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 KCTD6Q8NC69 237 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 CCNYQ8ND76 341 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 DTX3LQ8TDB6 740 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 BRSK1Q8TDC3 778 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 TADA1Q96BN2 335 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 CXorf40BQ96DE9 158 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 VPS35Q96QK1 796 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 CD180Q99467 661 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC25A23Q9BV35 468 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 ING2Q9H160 280 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 RARRES3Q9UL19 164 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 TMPRSS11EQ9UL52 423 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 TTLL3Q9Y4R7 772 aa9.66□□□□□ -0.86
TRAFD1-207ENST00000550051 NOTCH2Q04721 2471 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 UNC79Q9P2D8 2635 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 OR52A4PA6NMU1 304 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 BPIP17213 487 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 VCLP18206 1134 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 CCL11P51671 97 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 IFI35P80217 286 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 HSD11B2P80365 405 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 PDE1BQ01064 536 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 PPIDQ08752 370 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 DMPKQ09013 629 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 TUBB3Q13509 450 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 NR1I3Q14994 352 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 INPP5JQ15735 1006 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC14A2Q15849 920 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 KHDC1Q4VXA5 237 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 IZUMO3Q5VZ72 239 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 ALS2CLQ60I27 953 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 IRGCQ6NXR0 463 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 FAM199XQ6PEV8 388 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 CRTC3Q6UUV7 619 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 CARFQ8N187 725 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 D2HGDHQ8N465 521 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 OR8K5Q8NH50 307 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 ZFPM2Q8WW38 1151 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 SYN2Q92777 582 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 RNF31Q96EP0 1072 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 IMP4Q96G21 291 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF514Q96K75 400 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 LRFN5Q96NI6 719 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms