RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ZNF487B1APH4 448 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 PPP1R12AO14974 1030 aaPredicted RBP13.33□□□□□ -0.28
TROAP-211ENST00000549891 MTSS1O43312 755 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 PIRTP0C851 137 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 BRAFP15056 766 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 NELFEP18615 380 aaKnown RBP13.33□□□□□ -0.28
TROAP-211ENST00000549891 TAS2R40P59535 323 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 TMEM115Q12893 351 aaPredicted RBP13.33□□□□□ -0.28
TROAP-211ENST00000549891 DNASE1L3Q13609 305 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 PCSK7Q16549 785 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 FAM92BQ6ZTR7 304 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 VSIG1Q86XK7 387 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 TRAPPC5Q8IUR0 188 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 ZNF547Q8IVP9 402 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 APLFQ8IW19 511 aaPredicted RBP13.33□□□□□ -0.28
TROAP-211ENST00000549891 SIDT2Q8NBJ9 832 aaKnown RBP13.33□□□□□ -0.28
TROAP-211ENST00000549891 GDAP1Q8TB36 358 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 CPLX3Q8WVH0 158 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 AGAP3Q96P47 875 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 ZCCHC2Q9C0B9 1178 aaKnown RBP13.33□□□□□ -0.28
TROAP-211ENST00000549891 BRD8Q9H0E9 1235 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 LHX9Q9NQ69 397 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.33□□□□□ -0.28
TROAP-211ENST00000549891 RARRES3Q9UL19 164 aa13.33□□□□□ -0.28
TROAP-211ENST00000549891 SPENQ96T58 3664 aaKnown RBP13.33□□□□□ -0.28
TROAP-211ENST00000549891 LRRD1A4D1F6 860 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 OR52A4PA6NMU1 304 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 APOL1O14791 398 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 KIF1CO43896 1103 aaKnown RBP13.32□□□□□ -0.28
TROAP-211ENST00000549891 VPS4BO75351 444 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 MTX2O75431 263 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 NDST3O95803 873 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 FURINP09958 794 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 ZFXP17010 805 aaPredicted RBP13.32□□□□□ -0.28
TROAP-211ENST00000549891 BPIP17213 487 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 NR1D1P20393 614 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 PBX1P40424 430 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 TNNT3P45378 269 aaPredicted RBP13.32□□□□□ -0.28
TROAP-211ENST00000549891 ARL4DP49703 201 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 DRG2P55039 364 aaKnown RBP13.32□□□□□ -0.28
TROAP-211ENST00000549891 UBASH3AP57075 661 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 FANCCQ00597 558 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 PDE1BQ01064 536 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 ACY1Q03154 408 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 TUBB3Q13509 450 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 IQCB1Q15051 598 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 ODF2Q5BJF6 829 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 ZDHHC20Q5W0Z9 365 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 CPNE8Q86YQ8 564 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 PLD5Q8N7P1 536 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 THAP4Q8WY91 577 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 RAPGEF5Q92565 580 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 PSMG3-AS1Q96PY0 264 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 GPR87Q9BY21 358 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 LRRC4CQ9HCJ2 640 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 TLK1Q9UKI8 766 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 VPS4AQ9UN37 437 aa13.32□□□□□ -0.28
TROAP-211ENST00000549891 USP9YO00507 2555 aaPredicted RBP13.32□□□□□ -0.28
TROAP-211ENST00000549891 TNRC6AQ8NDV7 1962 aaKnown RBP13.32□□□□□ -0.28
TROAP-211ENST00000549891 A0A0A6YYK5 440 aaPredicted RBP13.31□□□□□ -0.28
TROAP-211ENST00000549891 FECHP22830 423 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 HMGCLP35914 325 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 MLLT10P55197 1068 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 RPS15P62841 145 aaKnown RBP13.31□□□□□ -0.28
TROAP-211ENST00000549891 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 SLC9A4Q6AI14 798 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 AMZ2Q86W34 360 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 KMT5CQ86Y97 462 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 CT55Q8WUE5 264 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 TADA1Q96BN2 335 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 RNF31Q96EP0 1072 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 SLC41A2Q96JW4 573 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 ANP32EQ9BTT0 268 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 TRABDQ9H4I3 376 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 ACTL8Q9H568 366 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 SEMA5BQ9P283 1151 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 TRIM10Q9UDY6 481 aa13.31□□□□□ -0.28
TROAP-211ENST00000549891 DNMT3AQ9Y6K1 912 aaPredicted RBP13.31□□□□□ -0.28
TROAP-211ENST00000549891 RP1L1Q8IWN7 2480 aaPredicted RBP13.31□□□□□ -0.28
TROAP-211ENST00000549891 SPTBN1Q01082 2364 aaKnown RBP13.3□□□□□ -0.28
TROAP-211ENST00000549891 TTLL8A6PVC2 850 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 K7EM74 188 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 MT-CYBP00156 380 aaPredicted RBP13.3□□□□□ -0.28
TROAP-211ENST00000549891 PTPN4P29074 926 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 DMPKQ09013 629 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 MESDQ14696 234 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 PLCL1Q15111 1095 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 SLC18A3Q16572 532 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 UGT8Q16880 541 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 ATP13A5Q4VNC0 1218 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 KHDC1Q4VXA5 237 aaKnown RBP13.3□□□□□ -0.28
TROAP-211ENST00000549891 TEX44Q53QW1 395 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 LDLRAP1Q5SW96 308 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 PWWP2BQ6NUJ5 590 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 BZW1Q7L1Q6 419 aaKnown RBP13.3□□□□□ -0.28
TROAP-211ENST00000549891 C11orf96Q7Z7L8 435 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 SYVN1Q86TM6 617 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 TMEM135Q86UB9 458 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms