RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 WASH6PQ9NQA3 447 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 IL17CQ9P0M4 197 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 UBR5O95071 2799 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 GAPDHSO14556 408 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 TERTO14746 1132 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 POLR1CO15160 346 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 CAPN5O15484 640 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 PPFIA2O75334 1257 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 LCA5LO95447 670 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 IDSP22304 550 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 MAP4P27816 1152 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 CA5AP35218 305 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 POLE2P56282 527 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 TMEM115Q12893 351 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 GTF2H3Q13889 308 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 SLC1A5Q15758 541 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 FAM151BQ6UXP7 276 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 UNC5BQ8IZJ1 945 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 SLC25A41Q8N5S1 370 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 DDHD1Q8NEL9 900 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 IPMKQ8NFU5 416 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 KRT35Q92764 455 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 KIAA1143Q96AT1 154 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 TGM7Q96PF1 710 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 GORASP1Q9BQQ3 440 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 TRIM4Q9C037 500 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 ADNPQ9H2P0 1102 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 ZNF768Q9H5H4 540 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 SLC40A1Q9NP59 571 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 HACD3Q9P035 362 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 WDR37Q9Y2I8 494 aa17.09■□□□□ 0.33
CHMP1A-205ENST00000548650 TOX3O15405 576 aaPredicted RBP17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 WISP1O95388 367 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 VCLP18206 1134 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 HLA-DPA1P20036 260 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 STAT5AP42229 794 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 MAGEA1P43355 309 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 CTSCP53634 463 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 DMPKQ09013 629 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 ABHD18Q0P651 414 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 CDC20Q12834 499 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 MPP3Q13368 585 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 MAP7Q14244 749 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 CHRNA6Q15825 494 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 PPP2R5EQ16537 467 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 ZDHHC20Q5W0Z9 365 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 BBS12Q6ZW61 710 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 GLT6D1Q7Z4J2 308 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 PRSS42Q7Z5A4 293 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 CCDC50Q8IVM0 306 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 RBM12BQ8IXT5 1001 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 GPR150Q8NGU9 434 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 GDAP1Q8TB36 358 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 BLOC1S5Q8TDH9 187 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 RBM41Q96IZ5 413 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 SLC25A18Q9H1K4 315 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 CLMPQ9H6B4 373 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 SMOXQ9NWM0 555 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 IL17BQ9UHF5 180 aa17.08■□□□□ 0.32
CHMP1A-205ENST00000548650 GLYATL1P3A0A0U1RQE8 302 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 HACD1B0YJ81 288 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 NKX2-8O15522 239 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 SUV39H1O43463 412 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 BUD23O43709 281 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 ZRANB2O95218 330 aaKnown RBP eCLIP17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 ZNF28P17035 718 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 AMD1P17707 334 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 OAS2P29728 719 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 SH3BP2P78314 561 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 KCNAB2Q13303 367 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 GPRC6AQ5T6X5 926 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 FAM83HQ6ZRV2 1179 aaPredicted RBP17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 PID1Q7Z2X4 250 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 RCOR2Q8IZ40 523 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 ESX1Q8N693 406 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 RASGEF1AQ8N9B8 481 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 BRSK1Q8TDC3 778 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 STARD8Q92502 1023 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 CXorf40BQ96DE9 158 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 CATSPER2Q96P56 530 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 ZCCHC2Q9C0B9 1178 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 GBA3Q9H227 469 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 TRIT1Q9H3H1 467 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 TRIM10Q9UDY6 481 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 RSPH14Q9UHP6 348 aa17.07■□□□□ 0.32
CHMP1A-205ENST00000548650 PTPN13Q12923 2485 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 APOC4-APOC2K7ER74 178 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 KIF1CO43896 1103 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 UGT1A9O60656 530 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 APOC2P02655 101 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 PRKAR1AP10644 381 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 UGT1A6P19224 532 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 UGT1A1P22309 533 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 UGT1A4P22310 534 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 TNNT3P45378 269 aaPredicted RBP17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 SEPHS1P49903 392 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 PPP1CAP62136 330 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 FOXM1Q08050 763 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms