RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC40A1Q9NP59 571 aa11.74□□□□□ -0.53
TRAFD1-205ENST00000548277 UBP1Q9NZI7 540 aa11.74□□□□□ -0.53
TRAFD1-205ENST00000548277 MAP10Q9P2G4 905 aa11.74□□□□□ -0.53
TRAFD1-205ENST00000548277 AMACRQ9UHK6 382 aa11.74□□□□□ -0.53
TRAFD1-205ENST00000548277 RARRES3Q9UL19 164 aa11.74□□□□□ -0.53
TRAFD1-205ENST00000548277 ZNF711Q9Y462 761 aa11.74□□□□□ -0.53
TRAFD1-205ENST00000548277 NBPF19A0A087WUL8 3843 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 A1L4Q6 167 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 RGSL1A5PLK6 1076 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 GOLGA6L19H0YKK7 550 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 AURKAO14965 403 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 SEC16AO15027 2179 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 SERPING1P05155 500 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 CYP1A2P05177 515 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 EBLN1P0CF75 366 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 BPIP17213 487 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 PBLDP30039 288 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 ARL4DP49703 201 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 ZBED6P86452 979 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 TMEM115Q12893 351 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 TUBB3Q13509 450 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 SEMA5AQ13591 1074 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 PDK2Q15119 407 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 CPZQ66K79 652 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 ALKBH5Q6P6C2 394 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 ABRAXAS1Q6UWZ7 409 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 NPNTQ6UXI9 565 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 TMC3Q7Z5M5 1100 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 NT5DC3Q86UY8 548 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 TRAPPC5Q8IUR0 188 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 ZNF547Q8IVP9 402 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 MAP7D3Q8IWC1 876 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 RAVER1Q8IY67 606 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 SPATA22Q8NHS9 363 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 KLHL6Q8WZ60 621 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 RAPGEF5Q92565 580 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 TTC25Q96NG3 672 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 MAP3K3Q99759 626 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 ACSS2Q9NR19 701 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 POT1Q9NUX5 634 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 CTTNBP2NLQ9P2B4 639 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 PLEKHB1Q9UF11 243 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 TMPRSS11EQ9UL52 423 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 CAPN11Q9UMQ6 739 aa11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 LUC7L2Q9Y383 392 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 CFAP20Q9Y6A4 193 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-205ENST00000548277 F5H423 210 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 TOX3O15405 576 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 UGT1A9O60656 530 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 SEMA7AO75326 666 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 PMPCBO75439 489 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 MT-CYBP00156 380 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 MT-ND3P03897 115 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 ATXN8OSP0DMR3 200 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 NELFEP18615 380 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 UGT1A6P19224 532 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 MX2P20592 715 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 UGT1A1P22309 533 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 UGT1A4P22310 534 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 KDELR1P24390 212 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 CAPZBP47756 277 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 ARCN1P48444 511 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 PMS2P54278 862 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 GTF2H3Q13889 308 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 PLCL1Q15111 1095 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 NOMO1Q15155 1222 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 ATP13A5Q4VNC0 1218 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 CAPRIN2Q6IMN6 1127 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 FBXO38Q6PIJ6 1188 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 PRSS42Q7Z5A4 293 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 GPR150Q8NGU9 434 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 NAT14Q8WUY8 206 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 MR1Q95460 341 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 HDAC11Q96DB2 347 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 ZNF830Q96NB3 372 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 RNF157Q96PX1 679 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 TRIB3Q96RU7 358 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 ZNF670Q9BS34 389 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 TIMM29Q9BSF4 260 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 SLC25A23Q9BV35 468 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 UGT1A7Q9HAW7 530 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 UGT1A10Q9HAW8 530 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 UGT1A8Q9HAW9 530 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 MAGEE1Q9HCI5 957 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 FAM8A1Q9UBU6 413 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 SPO11Q9Y5K1 396 aa11.72□□□□□ -0.53
TRAFD1-205ENST00000548277 SPTBN1Q01082 2364 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 UBA6A0AVT1 1052 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 A6NL46 340 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 BUD23O43709 281 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 VEGFDO43915 354 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 POP7O75817 140 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 PROSCO94903 275 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 RNF224P0DH78 156 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 TNNT1P13805 278 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 PTPN4P29074 926 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 HALP42357 657 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms