RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 MCFD2Q8NI22 146 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 KCTD13Q8WZ19 329 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 TFAP2CQ92754 450 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 LRRC3Q9BY71 257 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 MUC13Q9H3R2 512 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 MEAF6Q9HAF1 191 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 SMURF2Q9HAU4 748 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 ATP13A1Q9HD20 1204 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 PCDH12Q9NPG4 1184 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 CRTAC1Q9NQ79 661 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 GDAP2Q9NXN4 497 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 GIN1Q9NXP7 522 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 A8MX80 341 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 PIRO00625 290 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 PRRG1O14668 218 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 NDUFS2O75306 463 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 RPP40O75818 363 aaKnown RBP9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 CLPXO76031 633 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 C1QAP02745 245 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 FGF1P05230 155 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 C8BP07358 591 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 UROSP10746 265 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 GABRB3P28472 473 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 IDH2P48735 452 aaKnown RBP9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 GATMP50440 423 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 TRIP4Q15650 581 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 CPSF6Q16630 551 aaKnown RBP eCLIP9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 ANKDD1AQ495B1 522 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 PKDCCQ504Y2 493 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 NANOGNBQ7Z5D8 188 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 R3HCC1LQ7Z5L2 792 aaKnown RBP9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 CLEC14AQ86T13 490 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 STX19Q8N4C7 294 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 RTL3Q8N8U3 475 aaKnown RBP9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZNF420Q8TAQ5 688 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 SPPL2AQ8TCT8 520 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 ANKRD49Q8WVL7 239 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 ADGRE3Q9BY15 652 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 MIOSQ9NXC5 875 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 OPTCQ9UBM4 332 aa9.4□□□□□ -0.9
CALCOCO1-210ENST00000548263 FBP2O00757 339 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 B4GAT1O43505 415 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 ATE1O95260 518 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 TBX18O95935 607 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 KRT6AP02538 564 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 KRT6BP04259 564 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 HLA-DPA1P20036 260 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 PRKACGP22612 351 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 KRT6CP48668 564 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 RAB15P59190 212 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 NFE2Q16621 373 aaPredicted RBP9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 UNC50Q53HI1 259 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 TMC5Q6UXY8 1006 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 GPRIN1Q7Z2K8 1008 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 SZRD1Q7Z422 152 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 CILP2Q8IUL8 1156 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 ARL10Q8N8L6 244 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 PDPRQ8NCN5 879 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 OR10Q1Q8NGQ4 319 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 TMEM209Q96SK2 561 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 FBXO44Q9H4M3 255 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 RNF186Q9NXI6 227 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 ITGB1BP2Q9UKP3 347 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 DNAJC15Q9Y5T4 150 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 DOCK3Q8IZD9 2030 aa9.4□□□□□ -0.91
CALCOCO1-210ENST00000548263 DYTNA2CJ06 578 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 H3BMQ9 156 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 PPP6CO00743 305 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 BCKDKO14874 412 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 ZSCAN9O15535 394 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 WDR47O94967 919 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 LRATO95237 230 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 MED26O95402 600 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 RHOCP08134 193 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 RAP2AP10114 183 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 PKMP14618 531 aaKnown RBP9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 CAPN3P20807 821 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 CLCN2P51788 898 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 TPTEP56180 551 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 RUNX1T1Q06455 604 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 CSTF3Q12996 717 aaKnown RBP9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 ZNF549Q6P9A3 640 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 HID1Q8IV36 788 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 TMEM132CQ8N3T6 1108 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 OR9Q1Q8NGQ5 310 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 MCOLN3Q8TDD5 553 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 ZFYVE19Q96K21 471 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 COG8Q96MW5 612 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 RANBP9Q96S59 729 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 RBM4BQ9BQ04 359 aaKnown RBP9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 RBM4Q9BWF3 364 aaKnown RBP9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 UBA2Q9UBT2 640 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 GNPTGQ9UJJ9 305 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 TNPO3Q9Y5L0 923 aaKnown RBP9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 GPC6Q9Y625 555 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 ELOVL7A1L3X0 281 aa9.39□□□□□ -0.91
CALCOCO1-210ENST00000548263 CDC7O00311 574 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms