RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 GCNAQ96QF7 691 aa5.97□□□□□ -1.45
NPAS3-204ENST00000546849 UBTD1Q9HAC8 227 aa5.97□□□□□ -1.45
NPAS3-204ENST00000546849 MARCH4Q9P2E8 410 aaPredicted RBP5.97□□□□□ -1.45
NPAS3-204ENST00000546849 B3GALT5Q9Y2C3 310 aa5.97□□□□□ -1.45
NPAS3-204ENST00000546849 PCDHGB1Q9Y5G3 927 aa5.97□□□□□ -1.45
NPAS3-204ENST00000546849 PCDHAC2Q9Y5I4 1007 aa5.97□□□□□ -1.45
NPAS3-204ENST00000546849 ADGRL1O94910 1474 aa5.96□□□□□ -1.45
NPAS3-204ENST00000546849 ARHGEF40Q8TER5 1519 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 IGKV2D-30A0A075B6S6 120 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 hCG_1809904A0A1W2PP81 198 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 A0A1W2PPE2 198 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 A0A1W2PR64 198 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 DENND3A2RUS2 1198 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 MAGEA13PA6NCF6 341 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 C15orf62A8K5M9 175 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 TMEM189-UBE2V1I3L0A0 370 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 SH2B2O14492 632 aaPredicted RBP5.96□□□□□ -1.46
NPAS3-204ENST00000546849 PGM3O95394 542 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 NR2F1P10589 423 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 PDLIM4P50479 330 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 NANOS2P60321 138 aaKnown RBP5.96□□□□□ -1.46
NPAS3-204ENST00000546849 UBXN2AP68543 259 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 UBE2V1Q13404 147 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 SYT16Q17RD7 645 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 FAM98BQ52LJ0 330 aaKnown RBP5.96□□□□□ -1.46
NPAS3-204ENST00000546849 SETMARQ53H47 684 aaPredicted RBP5.96□□□□□ -1.46
NPAS3-204ENST00000546849 UNQ6126/PRO20091Q6UXV3 157 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 PLEKHM3Q6ZWE6 761 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 ADGRA1Q86SQ6 560 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 KMT5CQ86Y97 462 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 NME8Q8N427 588 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 GCSAMQ8N6F7 178 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 C1orf52Q8N6N3 182 aaKnown RBP5.96□□□□□ -1.46
NPAS3-204ENST00000546849 SECTM1Q8WVN6 248 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 PTERQ96BW5 349 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 ERP27Q96DN0 273 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 ERLEC1Q96DZ1 483 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 IGSF21Q96ID5 467 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 DUX5Q96PT3 197 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 ABHD1Q96SE0 405 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 CDRT15Q96T59 188 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 SPRY4Q9C004 299 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 SPATC1LQ9H0A9 340 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 CD93Q9NPY3 652 aa5.96□□□□□ -1.46
NPAS3-204ENST00000546849 TMEM184BQ9Y519 407 aaPredicted RBP5.96□□□□□ -1.46
NPAS3-204ENST00000546849 PDS5AQ29RF7 1337 aaKnown RBP5.96□□□□□ -1.46
NPAS3-204ENST00000546849 A0A1W2PR77 199 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 TMEM178BH3BS89 294 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 J3QR06 171 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 NDUFS4O43181 175 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 ZNF217O75362 1048 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 ZWINTO95229 277 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 MYOD1P15172 320 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 PRLRP16471 622 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 HRH2P25021 359 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 TNFRSF8P28908 595 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 CAPZA2P47755 286 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 TERF1P54274 439 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 RELQ04864 619 aaPredicted RBP5.95□□□□□ -1.46
NPAS3-204ENST00000546849 CXCL9Q07325 125 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 SLC20A2Q08357 652 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 KIF5AQ12840 1032 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 PLA2G7Q13093 441 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 ZNF234Q14588 700 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 ZNF585BQ52M93 769 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 GARNL3Q5VVW2 1013 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 LCN10Q6JVE6 187 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 GALNT13Q8IUC8 556 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 AFAP1Q8N556 730 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 LSMEM1Q8N8F7 131 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 OR5R1Q8NH85 324 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 SLC20A1Q8WUM9 679 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 TMEM255BQ8WV15 326 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 ABTB1Q969K4 478 aaPredicted RBP5.95□□□□□ -1.46
NPAS3-204ENST00000546849 PCYT2Q99447 389 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 NEURL2Q9BR09 285 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 SYT17Q9BSW7 474 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 IL25Q9H293 177 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 MMP27Q9H306 513 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 RCC2Q9P258 522 aaKnown RBP5.95□□□□□ -1.46
NPAS3-204ENST00000546849 ATAD2BQ9ULI0 1458 aa5.95□□□□□ -1.46
NPAS3-204ENST00000546849 TTC3P53804 2025 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 IGHV4OR15-8A0A075B7B6 117 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 OR5K3A6NET4 321 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 LILRA5A6NI73 299 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 ANKRD66B4E2M5 251 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 ZNHIT1O43257 154 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 ADAM20O43506 726 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 DDNO94850 711 aaPredicted RBP5.94□□□□□ -1.46
NPAS3-204ENST00000546849 CAMTA2O94983 1202 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 BCL10O95999 233 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 TRIM21P19474 475 aaKnown RBP5.94□□□□□ -1.46
NPAS3-204ENST00000546849 NMBRP28336 390 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 ISL1P61371 349 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 SIRPAP78324 504 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 GRAPQ13588 217 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 GTF2H2Q13888 395 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 BAATQ14032 418 aaPredicted RBP5.94□□□□□ -1.46
NPAS3-204ENST00000546849 RASA2Q15283 850 aa5.94□□□□□ -1.46
NPAS3-204ENST00000546849 ASIC2Q16515 512 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms