RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 SGF29Q96ES7 293 aa17.23■□□□□ 0.35
CD9-211ENST00000546073 SGSM3Q96HU1 749 aa17.23■□□□□ 0.35
CD9-211ENST00000546073 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.23■□□□□ 0.35
CD9-211ENST00000546073 CCDC68Q9H2F9 335 aa17.23■□□□□ 0.35
CD9-211ENST00000546073 SPATS2LQ9NUQ6 558 aaKnown RBP17.23■□□□□ 0.35
CD9-211ENST00000546073 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
CD9-211ENST00000546073 LRIT1Q9P2V4 623 aa17.23■□□□□ 0.35
CD9-211ENST00000546073 SLC2A6Q9UGQ3 507 aa17.23■□□□□ 0.35
CD9-211ENST00000546073 ACSL5Q9ULC5 683 aa17.23■□□□□ 0.35
CD9-211ENST00000546073 SNX24Q9Y343 169 aa17.23■□□□□ 0.35
CD9-211ENST00000546073 EME2A4GXA9 379 aaPredicted RBP17.22■□□□□ 0.35
CD9-211ENST00000546073 MGAT4DA6NG13 374 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 AGAP14A8MT82 685 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 NUDT21O43809 227 aaKnown RBP17.22■□□□□ 0.35
CD9-211ENST00000546073 FUCA1P04066 466 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 JUPP14923 745 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 PGAM1P18669 254 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 PSMA3P25788 255 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 NMBRP28336 390 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 ACADVLP49748 655 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 PLOD1Q02809 727 aaPredicted RBP17.22■□□□□ 0.35
CD9-211ENST00000546073 ACVR1Q04771 509 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 BCL7AQ4VC05 210 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 KIAA0930Q6ICG6 404 aaPredicted RBP17.22■□□□□ 0.35
CD9-211ENST00000546073 CEP128Q6ZU80 1094 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 CAND1Q86VP6 1230 aaKnown RBP17.22■□□□□ 0.35
CD9-211ENST00000546073 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 SLC35F3Q8IY50 421 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 CXorf40BQ96DE9 158 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 AHCYL2Q96HN2 611 aaKnown RBP17.22■□□□□ 0.35
CD9-211ENST00000546073 TCF12Q99081 682 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 SLC38A3Q99624 504 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 CCM2Q9BSQ5 444 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 DPH5Q9H2P9 285 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 WHRNQ9P202 907 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 DMDP11532 3685 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 DOCK9Q9BZ29 2069 aa17.22■□□□□ 0.35
CD9-211ENST00000546073 TRBV5-4A0A0C4DH59 114 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 C17orf113A0A1B0GUU1 675 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 IFRD1O00458 451 aaPredicted RBP17.21■□□□□ 0.35
CD9-211ENST00000546073 GAPDHSO14556 408 aaPredicted RBP17.21■□□□□ 0.35
CD9-211ENST00000546073 FANCGO15287 622 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 GPR39O43194 453 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 RAD51CO43502 376 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 USP1O94782 785 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 SEC31AO94979 1220 aaKnown RBP17.21■□□□□ 0.35
CD9-211ENST00000546073 VIPP01282 170 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 SLC35G4P0C7Q5 338 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 F3P13726 295 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 PNLIPP16233 465 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 FOXN2P32314 431 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 ARSDP51689 593 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 LONRF1Q17RB8 773 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 ANKRD20A4Q4UJ75 823 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 SYTL3Q4VX76 610 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 GLE1Q53GS7 698 aaKnown RBP17.21■□□□□ 0.35
CD9-211ENST00000546073 PTRHD1Q6GMV3 140 aaKnown RBP17.21■□□□□ 0.35
CD9-211ENST00000546073 HIBCHQ6NVY1 386 aaPredicted RBP17.21■□□□□ 0.35
CD9-211ENST00000546073 NRROSQ86YC3 692 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 PNPLA1Q8N8W4 532 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 KYQ8NBH2 561 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.21■□□□□ 0.35
CD9-211ENST00000546073 GPR156Q8NFN8 814 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 ADAMTS14Q8WXS8 1223 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 MFSD3Q96ES6 412 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 ZNF778Q96MU6 729 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 PANX3Q96QZ0 392 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 PPANQ9NQ55 473 aaKnown RBP17.21■□□□□ 0.35
CD9-211ENST00000546073 C20orf96Q9NUD7 363 aaPredicted RBP17.21■□□□□ 0.35
CD9-211ENST00000546073 TMPRSS11EQ9UL52 423 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 PLEKHM1Q9Y4G2 1056 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 MRFAP1Q9Y605 127 aa17.21■□□□□ 0.35
CD9-211ENST00000546073 UBA6A0AVT1 1052 aaPredicted RBP17.2■□□□□ 0.34
CD9-211ENST00000546073 OR51F1A6NGY5 319 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 H3BMM5 538 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 KPNA5O15131 536 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 GIMD1P0DJR0 217 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 TMED2Q15363 201 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 SEPT7Q16181 437 aaKnown RBP17.2■□□□□ 0.34
CD9-211ENST00000546073 DBN1Q16643 649 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 SPANXN3Q5MJ09 141 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 KCTD16Q68DU8 428 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 GUSBP11Q6P575 273 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 CES3Q6UWW8 571 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 DHRS13Q6UX07 377 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 PACS1Q6VY07 963 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 ZNF534Q76KX8 674 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 TMPRSS12Q86WS5 348 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 CFAP206Q8IYR0 622 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 ARL14Q8N4G2 192 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 OR2L2Q8NH16 312 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 HM13Q8TCT9 377 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 EBNA1BP2Q99848 306 aaKnown RBP17.2■□□□□ 0.34
CD9-211ENST00000546073 FAM167BQ9BTA0 163 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 TREX1Q9NSU2 369 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 FAM8A1Q9UBU6 413 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 ZC3H7BQ9UGR2 993 aaKnown RBP17.2■□□□□ 0.34
CD9-211ENST00000546073 GNPTGQ9UJJ9 305 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 HEBP2Q9Y5Z4 205 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms