RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SPOCK1Q08629 439 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 KIR2DS5Q14953 304 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 PNLIPRP3Q17RR3 467 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 DPCR1Q3MIW9 517 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 ZNF805Q5CZA5 627 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 ACAD10Q6JQN1 1059 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 SDCCAG8Q86SQ7 713 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-224ENST00000545688 MAPK1IP1LQ8NDC0 245 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 METTL6Q8TCB7 284 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 HM13Q8TCT9 377 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 ZUFSPQ96AP4 578 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 RRP36Q96EU6 259 aaKnown RBP4.33□□□□□ -1.72
SNHG1-224ENST00000545688 ZNF599Q96NL3 588 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 ASCL2Q99929 193 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 SIL1Q9H173 461 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 TAS2R10Q9NYW0 307 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 CFAP43Q8NDM7 1665 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 MADDQ8WXG6 1647 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 KIF27Q86VH2 1401 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 ANKRD66B4E2M5 251 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 BUD23O43709 281 aaKnown RBP4.32□□□□□ -1.72
SNHG1-224ENST00000545688 IGLV1-44P01699 117 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 ICAM1P05362 532 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 KRT5P13647 590 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 NR2C2P49116 596 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 CEBPZQ03701 1054 aaKnown RBP4.32□□□□□ -1.72
SNHG1-224ENST00000545688 CCNG2Q16589 344 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 PM20D2Q8IYS1 436 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 GBGT1Q8N5D6 347 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 RDM1Q8NG50 284 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 WDR20Q8TBZ3 569 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 SMARCE1Q969G3 411 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 SEMA3CQ99985 751 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 PSD2Q9BQI7 771 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 RANGRFQ9HD47 186 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-224ENST00000545688 ADPRHL2Q9NX46 363 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 CRYL1Q9Y2S2 319 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 LTBP4Q8N2S1 1624 aa4.32□□□□□ -1.72
SNHG1-224ENST00000545688 IQSEC2Q5JU85 1478 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 PTPRTO14522 1441 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 A0A1B0GVY2 172 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 A0A1W2PQF6 199 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 KANSL1LA0AUZ9 987 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 DUXAA6NLW8 204 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 SYNCRIPO60506 623 aaKnown RBP4.31□□□□□ -1.72
SNHG1-224ENST00000545688 TFAP2AP05549 437 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 KRT19P08727 400 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 PRCPP42785 496 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 RPL7AP62424 266 aaKnown RBP4.31□□□□□ -1.72
SNHG1-224ENST00000545688 RAB6CQ53S08 254 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 PACS1Q6VY07 963 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 RASGEF1CQ8N431 466 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 ZNF473Q8WTR7 871 aaKnown RBP4.31□□□□□ -1.72
SNHG1-224ENST00000545688 FAM149B1Q96BN6 582 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 EGLN2Q96KS0 407 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 SLX1AQ9BQ83 275 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 RAB6CQ9H0N0 254 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 MAGIXQ9H6Y5 334 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 ZBTB20Q9HC78 741 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-224ENST00000545688 CWC15Q9P013 229 aaKnown RBP4.31□□□□□ -1.72
SNHG1-224ENST00000545688 PDP2Q9P2J9 529 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 UBA2Q9UBT2 640 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-224ENST00000545688 ABCA8O94911 1581 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 IQGAP2Q13576 1575 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 FRMPD1Q5SYB0 1578 aa4.31□□□□□ -1.72
SNHG1-224ENST00000545688 NEO1Q92859 1461 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 A6NLC8 198 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 CLIC2O15247 247 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 MAP2K2P36507 400 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 PBX3P40426 434 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 MRPS34P82930 218 aaKnown RBP4.3□□□□□ -1.72
SNHG1-224ENST00000545688 CSTF3Q12996 717 aaKnown RBP4.3□□□□□ -1.72
SNHG1-224ENST00000545688 LRIF1Q5T3J3 769 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 ZNF790Q6PG37 636 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 SEPT14Q6ZU15 432 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 EMC1Q8N766 993 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 HCAR2Q8TDS4 363 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 ANKRD9Q96BM1 317 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-224ENST00000545688 PRMT6Q96LA8 375 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-224ENST00000545688 MAP7D2Q96T17 732 aa4.3□□□□□ -1.72
SNHG1-224ENST00000545688 FHOD3Q2V2M9 1422 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 A0A087X002 238 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 H0YIN7 160 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 PSMD14O00487 310 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 ZNF821O75541 412 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-224ENST00000545688 SLC25A12O75746 678 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 LIPFP07098 398 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 IGHV4-38-2P0DP08 117 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 ZNF26P17031 533 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-224ENST00000545688 GNAZP19086 355 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 IRX1P78414 480 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-224ENST00000545688 ZBED6P86452 979 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 SLC5A8Q8N695 610 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 PAF1Q8N7H5 531 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 TSPYL6Q8N831 410 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 SLC38A9Q8NBW4 561 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 TMEM116Q8NCL8 245 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 PPP4R1Q8TF05 950 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 PERPQ96FX8 193 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 ART5Q96L15 291 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms